RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ASPSCR1Q9BZE9 553 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 PLA2G4CQ9UP65 541 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 TOPAZ1Q8N9V7 1692 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 OR6C75A6NL08 312 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 SPAG7O75391 227 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 SASH3O75995 380 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 NOS2P35228 1153 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 PTK7Q13308 1070 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 LRRC38Q5VT99 294 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 MOB2Q70IA6 237 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 VAV3Q9UKW4 847 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 SNCAIPQ9Y6H5 919 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 SPEF2Q9C093 1822 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 ASTN2O75129 1339 aaPredicted RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 SOAT2O75908 522 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 MICAL2O94851 1124 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 HOXB8P17481 243 aaPredicted RBP17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 PCSK7Q16549 785 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 IL31RAQ8NI17 732 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 TEX12Q9BXU0 123 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 PRKD2Q9BZL6 878 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 VPS28Q9UK41 221 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 FZD1Q9UP38 647 aa17.36■□□□□ 0.37
PCDHA13-202ENST00000409494 KLRC4O43908 158 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 PGK1P00558 417 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 LTFP02788 710 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 PTPN1P18031 435 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 CTCFP49711 727 aaPredicted RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 STX3Q13277 289 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM131BQ86XD5 332 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 PCDH9Q9HC56 1237 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 PKD2L2Q9NZM6 624 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 CSH1P0DML2 217 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 CSH2P0DML3 217 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 VCLP18206 1134 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 ITGALP20701 1170 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 RNF135Q8IUD6 432 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 F5H423 210 aaPredicted RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 DIAPH2O60879 1101 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 ATP9AO75110 1047 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 OTUD4Q01804 1114 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 ZACNQ401N2 412 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM43BQ6ZT52 329 aaPredicted RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 DSG4Q86SJ6 1040 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 METTL3Q86U44 580 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 TOP6BLQ8N6T0 577 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 STN1Q9H668 368 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 MOXD2PA6NHM9 499 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 CSDE1O75534 798 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 MYL2P10916 166 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 KCNA2P16389 499 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 LBRQ14739 615 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 ZNF284Q2VY69 593 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 FAM9CQ8IZT9 166 aa17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 ZBTB45Q96K62 511 aaPredicted RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 UTP6Q9NYH9 597 aaKnown RBP17.35■□□□□ 0.37
PCDHA13-202ENST00000409494 CFLARO15519 480 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 RAMP2O60895 175 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 BMP6P22004 513 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 RHOAP61586 193 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 MARC1Q5VT66 337 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 NECAB2Q7Z6G3 386 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SETD3Q86TU7 594 aaPredicted RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 FIBCD1Q8N539 461 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 ZNF446Q9NWS9 450 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 G3BP2Q9UN86 482 aaKnown RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 H2AFYO75367 372 aaKnown RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 MMP3P08254 477 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SERPINF2P08697 491 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 RARGP13631 454 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 ADIGQ0VDE8 80 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 RBBP7Q16576 425 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 FAXDC2Q96IV6 333 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SCUBE2Q9NQ36 999 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 RIC8BQ9NVN3 520 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SHOC2Q9UQ13 582 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 FGF10O15520 208 aaPredicted RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 MYL4P12829 197 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 MARSP56192 900 aaKnown RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 ITGB3BPQ13352 177 aaPredicted RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC29A2Q14542 456 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 STARD3Q14849 445 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 AGAP9Q5VTM2 703 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SUGP1Q8IWZ8 645 aaKnown RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC2A14Q8TDB8 520 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC20A1Q8WUM9 679 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 CAVIN3Q969G5 261 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 LENG9Q96B70 501 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 PACSIN1Q9BY11 444 aa17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 PABPC3Q9H361 631 aaKnown RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 AFDNP55196 1824 aaKnown RBP17.34■□□□□ 0.37
PCDHA13-202ENST00000409494 SEPT4O43236 478 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 CKBP12277 381 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms