RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 SLCO6A1Q86UG4 719 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 OSTM1Q86WC4 334 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 TTC30AQ86WT1 665 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 METTL23Q86XA0 190 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 CBWD2Q8IUF1 395 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 SLC41A1Q8IVJ1 513 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 ELOA2Q8IYF1 753 aaPredicted RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 SMYD4Q8IYR2 804 aaPredicted RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 DCP1BQ8IZD4 617 aaKnown RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 THEM5Q8N1Q8 247 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 PDCL2Q8N4E4 241 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 MINDY1Q8N5J2 469 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 DEFB119Q8N690 84 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 CSGALNACT2Q8N6G5 542 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 PNPLA1Q8N8W4 532 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 TTC16Q8NEE8 873 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 CCDC26Q8TAB7 109 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 WHAMMQ8TF30 809 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 ADAMTS14Q8WXS8 1223 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 ZDHHC16Q969W1 377 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 EXOC4Q96A65 974 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 CCDC127Q96BQ5 260 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 ACBD6Q9BR61 282 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 RNF38Q9H0F5 515 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 KCTD10Q9H3F6 313 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 PDE11AQ9HCR9 933 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 TRPC7Q9HCX4 862 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 ABCB6Q9NP58 842 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 LMBRD1Q9NUN5 540 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 DNAAF2Q9NVR5 837 aaKnown RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 CACNA2D2Q9NY47 1150 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 CGNQ9P2M7 1197 aaKnown RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 MAN1B1Q9UKM7 699 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 L1RE1Q9UN81 338 aa6.6□□□□□ -1.35
RPA3-204ENST00000406109 R3HCC1Q9Y3T6 440 aaKnown RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 ARID1BQ8NFD5 2236 aaPredicted RBP6.6□□□□□ -1.35
RPA3-204ENST00000406109 LEFTY2O00292 366 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 GABRDO14764 452 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 SH3BP5O60239 455 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 OPHN1O60890 802 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 ALDH1A2O94788 518 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 KAT7O95251 611 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 NFATC1O95644 943 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 NR3C1P04150 777 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 CFIP05156 583 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 CKMP06732 381 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 KRT19P08727 400 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 TMEM191BP0C7N4 346 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 DLATP10515 647 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 HDCP19113 662 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 TNNI1P19237 187 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 RPL13P26373 211 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 GFPT1Q06210 699 aaPredicted RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 NR1H3Q13133 447 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 ADAM9Q13443 819 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 DHCR24Q15392 516 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 SURF1Q15526 300 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 TRIP6Q15654 476 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 SNRNP35Q16560 246 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 NFE2Q16621 373 aaPredicted RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 DUOXA2Q1HG44 320 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 CFAP221Q4G0U5 840 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 LMBRD2Q68DH5 695 aaPredicted RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 ANKRD40Q6AI12 368 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 FAM171BQ6P995 826 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 FILIP1Q7Z7B0 1213 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 MIB1Q86YT6 1006 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 BRSK2Q8IWQ3 736 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 GUF1Q8N442 669 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 CEP76Q8TAP6 659 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 SPATA20Q8TB22 786 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 ADAM32Q8TC27 787 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 HMGB4Q8WW32 186 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 CRELD1Q96HD1 420 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 ANKRD36BP1Q96IX9 119 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 FAM84AQ96KN4 292 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 GTPBP2Q9BX10 602 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 GTPBP4Q9BZE4 634 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 DMAC2Q9NW81 257 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 UXTQ9UBK9 157 aaPredicted RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 GTF3C4Q9UKN8 822 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 AGAP1Q9UPQ3 857 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 TRAF3IP3Q9Y228 551 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
RPA3-204ENST00000406109 TLN1Q9Y490 2541 aaKnown RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 UBR5O95071 2799 aaPredicted RBP6.59□□□□□ -1.35
RPA3-204ENST00000406109 USP9XQ93008 2570 aaPredicted RBP6.58□□□□□ -1.36
RPA3-204ENST00000406109 IGHV1OR15-9A0A0B4J2B8 117 aa6.58□□□□□ -1.36
RPA3-204ENST00000406109 A0A1W2PQF6 199 aa6.58□□□□□ -1.36
RPA3-204ENST00000406109 TCRBV21S2A2A0A5A6 115 aa6.58□□□□□ -1.36
RPA3-204ENST00000406109 ZNF840PA6NDX5 716 aa6.58□□□□□ -1.36
RPA3-204ENST00000406109 CYSRT1A8MQ03 144 aa6.58□□□□□ -1.36
RPA3-204ENST00000406109 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
RPA3-204ENST00000406109 CETN3O15182 167 aa6.58□□□□□ -1.36
RPA3-204ENST00000406109 PHACTR2O75167 634 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms