RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 ESRRAP11474 423 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 JUNDP17535 347 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 EN2P19622 333 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 C5AR1P21730 350 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 EEF1GP26641 437 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 GP5P40197 560 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 EIF2DP41214 584 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ARCN1P48444 511 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 OLR1P78380 273 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CXCL9Q07325 125 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 PPIDQ08752 370 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SQLEQ14534 574 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TRADDQ15628 312 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 FUT11Q495W5 492 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 XKR3Q5GH77 459 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 NBPF12Q5TAG4 269 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CREB3L3Q68CJ9 461 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SULT6B1Q6IMI4 303 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ZCCHC12Q6PEW1 402 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 PAPD4Q6PIY7 484 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 BLOC1S3Q6QNY0 202 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 HHIPL2Q6UWX4 724 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 MAEAQ7L5Y9 396 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CPLX4Q7Z7G2 160 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 DDX53Q86TM3 631 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TTC5Q8N0Z6 440 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ZNF321PQ8N8H1 164 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 RNF152Q8N8N0 203 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CNBD1Q8NA66 436 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ARRDC4Q8NCT1 418 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 LRRN4CLQ8ND94 238 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 KIF18AQ8NI77 898 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 NPLOC4Q8TAT6 608 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CCDC110Q8TBZ0 833 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ZNF566Q969W8 418 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TRIM43Q96BQ3 446 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SIPA1Q96FS4 1042 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ART5Q96L15 291 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 KIFC3Q9BVG8 833 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 STK33Q9BYT3 514 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 GPR63Q9BZJ6 419 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ANKRD2Q9GZV1 360 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 R3HDMLQ9H3Y0 253 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 HAUS4Q9H6D7 363 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ERVK-5Q9HDB9 667 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SNX15Q9NRS6 342 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CCM2LQ9NUG4 571 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 GDAP2Q9NXN4 497 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TUBA8Q9NY65 449 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 EMC3Q9P0I2 261 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 AMACRQ9UHK6 382 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SLC39A10Q9ULF5 831 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 USP20Q9Y2K6 914 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 USP15Q9Y4E8 981 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ATP6V1DQ9Y5K8 247 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 IRS2Q9Y4H2 1338 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 NPC1L1Q9UHC9 1359 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 LOC100653049A0A140TA62 436 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 A0A1W2PP55 124 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 hCG_1809904A0A1W2PP81 198 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 A0A1W2PPC1 479 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 A0A1W2PPE2 198 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 A0A1W2PR64 198 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 A4D1N5 150 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 AQP12BA6NM10 295 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 MEIS3P2A8K0S8 358 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 FOXO6A8MYZ6 492 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 PTGES3LE9PB15 166 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 GOLGA8SH3BPF8 625 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ATXN7O15265 892 aaPredicted RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ARHGAP6O43182 974 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ZW10O43264 779 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 IDH1O75874 414 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 KRT34O76011 436 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 DLGAP3O95886 979 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ALDH1A1P00352 501 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ALBP02768 609 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 RB1P06400 928 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ITGAVP06756 1048 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 EPB41P11171 864 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 PLCG1P19174 1290 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ENDOUP21128 410 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CSTF2P33240 577 aaKnown RBP eCLIP4.11□□□□□ -1.752e-12■■■■□ 20.9
CLHC1-201ENST00000401408 ADRA1BP35368 520 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SLC16A2P36021 539 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 ARL3P36405 182 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 STAT5AP42229 794 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CAMLGP49069 296 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SCNN1GP51170 649 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SLC8A3P57103 927 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TRA2BP62995 288 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 CSNK2BP67870 215 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TYRO3Q06418 890 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 MPP3Q13368 585 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 MAMLD1Q13495 774 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SLC12A1Q13621 1099 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 TRIM25Q14258 630 aaKnown RBP4.11□□□□□ -1.75
CLHC1-201ENST00000401408 SEC23AQ15436 765 aa4.11□□□□□ -1.75
CLHC1-201ENST00000401408 MDH1BQ5I0G3 518 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms