RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
VAMP1-202ENST00000396308 OLA1Q9NTK5 396 aaKnown RBP16.11■□□□□ 0.17
VAMP1-202ENST00000396308 UXTQ9UBK9 157 aaPredicted RBP16.11■□□□□ 0.17
VAMP1-202ENST00000396308 YBX2Q9Y2T7 364 aaKnown RBP16.11■□□□□ 0.17
VAMP1-202ENST00000396308 PCDHA3Q9Y5H8 950 aa16.11■□□□□ 0.17
VAMP1-202ENST00000396308 INSL5Q9Y5Q6 135 aa16.11■□□□□ 0.17
VAMP1-202ENST00000396308 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
VAMP1-202ENST00000396308 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 YJEFN3A6XGL0 299 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 E7ENQ6 273 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 H3BNC9 293 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 SOAT2O75908 522 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 F9P00740 461 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 KRT1P04264 644 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 ERVFC1P60507 584 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 AMPD2Q01433 879 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 TAF5Q15542 800 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 BSPRYQ5W0U4 402 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 RTL10Q7L3V2 364 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 CCDC50Q8IVM0 306 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 CEP112Q8N8E3 955 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 GIPC2Q8TF65 315 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 OVCA2Q8WZ82 227 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
VAMP1-202ENST00000396308 ASB3Q9Y575 518 aa16.1■□□□□ 0.17
VAMP1-202ENST00000396308 M0QYT0 321 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 FSCN2O14926 492 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 FANCGO15287 622 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 GRM6O15303 877 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 TGM5O43548 720 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 CEP104O60308 925 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 LRCH4O75427 683 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 SEC24AO95486 1093 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 VNN2O95498 520 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 C1RP00736 705 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 ATF6P18850 670 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 CXCR5P32302 372 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
VAMP1-202ENST00000396308 DEUP1Q05D60 604 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 TWF1Q12792 350 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 C15orf59Q2T9L4 293 aaPredicted RBP16.09■□□□□ 0.17
VAMP1-202ENST00000396308 CCDC14Q49A88 953 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 SCYL2Q6P3W7 929 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 KATNAL2Q8IYT4 538 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 STKLD1Q8NE28 680 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 SLC7A14Q8TBB6 771 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 GPR152Q8TDT2 470 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 NDRG1Q92597 394 aaKnown RBP16.09■□□□□ 0.17
VAMP1-202ENST00000396308 CD101Q93033 1021 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 CAPZA3Q96KX2 299 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 TBCBQ99426 244 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 TTLL2Q9BWV7 592 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 GMIPQ9P107 970 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 FBXW11Q9UKB1 542 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
VAMP1-202ENST00000396308 COLQQ9Y215 455 aaPredicted RBP16.09■□□□□ 0.17
VAMP1-202ENST00000396308 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.16
VAMP1-202ENST00000396308 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
VAMP1-202ENST00000396308 MIPP30301 263 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 PBX2P40425 430 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 PPP3CCP48454 512 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 ARL13BQ3SXY8 428 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 PPM1LQ5SGD2 360 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 HFE2Q6ZVN8 426 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 KREMEN2Q8NCW0 462 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 EXD1Q8NHP7 514 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 MAIP1Q8WWC4 291 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 ARNTL2Q8WYA1 636 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 EDEM1Q92611 657 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 KRT35Q92764 455 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.16
VAMP1-202ENST00000396308 TRMT2BQ96GJ1 504 aaKnown RBP16.08■□□□□ 0.16
VAMP1-202ENST00000396308 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 ZNF512Q96ME7 567 aaPredicted RBP16.08■□□□□ 0.16
VAMP1-202ENST00000396308 GCNAQ96QF7 691 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 NPY6RQ99463 290 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 L2HGDHQ9H9P8 463 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 DDIT4Q9NX09 232 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 CLIC5Q9NZA1 410 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 IL37Q9NZH6 218 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 NAALADL1Q9UQQ1 740 aa16.08■□□□□ 0.16
VAMP1-202ENST00000396308 SYNJ2BP-COX16A0A087WUM0 186 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 GOLGA6L10A0A0M3HER8 536 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 SRGAP2O75044 1071 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 ARHGEF15O94989 841 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.16
VAMP1-202ENST00000396308 C8AP07357 584 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 AIF1P55008 147 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 TAS2R40P59535 323 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 COPS2P61201 443 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
VAMP1-202ENST00000396308 TAF10Q12962 218 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 NME3Q13232 169 aa16.07■□□□□ 0.16
VAMP1-202ENST00000396308 KRT81Q14533 505 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms