RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 NR3C2P08235 984 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CD48P09326 243 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 L1CAMP32004 1257 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 ALDH18A1P54886 795 aaKnown RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 KCNT1Q5JUK3 1230 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 RABGAP1LQ5R372 815 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CES4AQ5XG92 561 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 DENND1BQ6P3S1 775 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 RFX8Q6ZV50 586 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 KIAA0319LQ8IZA0 1049 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CCDC33Q8N5R6 958 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 ACMSDQ8TDX5 336 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 RILPQ96NA2 401 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 NDNQ99608 321 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 KLHL4Q9C0H6 718 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 EBF3Q9H4W6 596 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 XAB2Q9HCS7 855 aaKnown RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 HOMER2Q9NSB8 354 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 FBXO40Q9UH90 709 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 TMCO1Q9UM00 188 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 KDM4FA0A1W2PPD8 638 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CLRN2A0PK11 232 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 FAM159BA6NKW6 160 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 MIPP30301 263 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 ACTR2P61160 394 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 MTERF2Q49AM1 385 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 RAPH1Q70E73 1250 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CYS1Q717R9 158 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 XYLT1Q86Y38 959 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 DDX50Q9BQ39 737 aaKnown RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 KLC2Q9H0B6 622 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 ASNSD1Q9NWL6 643 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 ATXN10Q9UBB4 475 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 LRRIQ4A6NIV6 560 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CREB3O43889 395 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 SUPT20HL2P0C7V6 817 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 MAGEA3P43357 314 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 MYL6P60660 151 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 TUBB3Q13509 450 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 LRRC23Q53EV4 343 aaPredicted RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 ILDR2Q71H61 639 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 TAB3Q8N5C8 712 aaPredicted RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 ACTRT2Q8TDY3 377 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 NAT14Q8WUY8 206 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 USP29Q9HBJ7 922 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 RAB6BQ9NRW1 208 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 USP18Q9UMW8 372 aa9.02□□□□□ -0.97
BDNF-204ENST00000395980 CTDP1Q9Y5B0 961 aaPredicted RBP9.02□□□□□ -0.97
BDNF-204ENST00000395980 CXorf49A8MYA2 514 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 FAM189A1O60320 539 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 USP1O94782 785 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 CST3P01034 146 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 PRDX6P30041 224 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 COPAP53621 1224 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 DUOXA2Q1HG44 320 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 MDH1BQ5I0G3 518 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 GSDMBQ8TAX9 411 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 PIWIL2Q8TC59 973 aaKnown RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 MCRS1Q96EZ8 462 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 FAM210AQ96ND0 272 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 NRDE2Q9H7Z3 1164 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 PLAC1Q9HBJ0 212 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 DNAJC28Q9NX36 388 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 DOCK5Q9H7D0 1870 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 BCLAF3A2AJT9 711 aaKnown RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 ONECUT3O60422 494 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 C6orf222P0C671 652 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 TGM2P21980 687 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 GABRB2P47870 512 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 PDE1BQ01064 536 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 MTM1Q13496 603 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 CAND1Q86VP6 1230 aaKnown RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 NDUFAF2Q8N183 169 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 GSTCDQ8NEC7 633 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 CALN1Q9BXU9 219 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 MAF1Q9H063 256 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 CCDC195A0A1B0GUA6 201 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 H7C0C1 242 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 ALOX15P16050 662 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 ASPAP45381 313 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 ATP5OP48047 213 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 MSLNQ13421 630 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 TRPC3Q13507 836 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 MAP7Q14244 749 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 ANKRD20A4Q4UJ75 823 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 PABPC1LQ4VXU2 614 aaKnown RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 CFAP157Q5JU67 520 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 RSBN1LQ6PCB5 846 aaPredicted RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 USP6NLQ92738 828 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 TMEM143Q96AN5 459 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 MTMR12Q9C0I1 747 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 SMYD2Q9NRG4 433 aa9.01□□□□□ -0.97
BDNF-204ENST00000395980 APOBEC2Q9Y235 224 aaKnown RBP9.01□□□□□ -0.97
BDNF-204ENST00000395980 SLC15A5A6NIM6 579 aa9□□□□□ -0.97
BDNF-204ENST00000395980 YDJCA8MPS7 323 aa9□□□□□ -0.97
BDNF-204ENST00000395980 OATP04181 439 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms