RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 LNX1Q8TBB1 728 aaPredicted RBP20.09■□□□□ 0.81
CXXC4-201ENST00000394767 CELF6Q96J87 481 aaKnown RBP20.09■□□□□ 0.81
CXXC4-201ENST00000394767 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
CXXC4-201ENST00000394767 IQANK1A0A1B0GTG1 560 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 NDUFAB1O14561 156 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 RPL17P18621 184 aaKnown RBP20.08■□□□□ 0.81
CXXC4-201ENST00000394767 SLC39A5Q6ZMH5 540 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 DCLK2Q8N568 766 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 FBXO22Q8NEZ5 403 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 SYN3O14994 580 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 CSF2RAP15509 400 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 NOMO3P69849 1222 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 OTUD4Q01804 1114 aaKnown RBP20.08■□□□□ 0.81
CXXC4-201ENST00000394767 ARHGEF7Q14155 803 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 MAP7D1Q3KQU3 841 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 PPP2R2DQ66LE6 453 aa20.08■□□□□ 0.81
CXXC4-201ENST00000394767 TRAV19A0A0A6YYK7 116 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 SIGLEC16A6NMB1 481 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 SMARCB1Q12824 385 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 C11orf63Q6NUN7 778 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 RAB44Q7Z6P3 723 aaPredicted RBP20.08■□□□□ 0.8
CXXC4-201ENST00000394767 TCF25Q9BQ70 676 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 NRP1O14786 923 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 ZC3H12AQ5D1E8 599 aaKnown RBP20.08■□□□□ 0.8
CXXC4-201ENST00000394767 ANKMY2Q8IV38 441 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 DNMT3LQ9UJW3 386 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 PLA2G4CQ9UP65 541 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 OR1E1P30953 314 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 LRRC15Q8TF66 581 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 GAS2L1Q99501 681 aaPredicted RBP20.08■□□□□ 0.8
CXXC4-201ENST00000394767 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 VANGL2Q9ULK5 521 aa20.08■□□□□ 0.8
CXXC4-201ENST00000394767 IGKV6D-21A0A0A0MT36 114 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 GABRR2P28476 465 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 KPNA2P52292 529 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 INTS6LQ5JSJ4 861 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 C6orf163Q5TEZ5 329 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 NUGGCQ68CJ6 796 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 KCNT2Q6UVM3 1135 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 JAMLQ86YT9 394 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 RSPH1Q8WYR4 309 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 FAM8A1Q9UBU6 413 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 RBM47A0AV96 593 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 XPO1O14980 1071 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 STIP1P31948 543 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 PSEN1P49768 467 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 FAXCQ5TGI0 409 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 ATP11CQ8NB49 1132 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 PPHLN1Q8NEY8 458 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 MYCBPAPQ8TBZ2 947 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 RILPQ96NA2 401 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 DCLK3Q9C098 648 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 SLC25A13Q9UJS0 675 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 TKTP29401 623 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 TIGD5Q53EQ6 642 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 VSTM1Q6UX27 236 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 TPGS1Q6ZTW0 290 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 IRF2BP2Q7Z5L9 587 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 XPO7Q9UIA9 1087 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 PMS2P54278 862 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 MAMLD1Q13495 774 aa20.07■□□□□ 0.8
CXXC4-201ENST00000394767 PRSS55Q6UWB4 352 aaPredicted RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 TPX2Q9ULW0 747 aaKnown RBP20.07■□□□□ 0.8
CXXC4-201ENST00000394767 TCHHQ07283 1943 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 COILP38432 576 aaPredicted RBP20.06■□□□□ 0.8
CXXC4-201ENST00000394767 EIF3BP55884 814 aaKnown RBP20.06■□□□□ 0.8
CXXC4-201ENST00000394767 TAF1BQ53T94 588 aaPredicted RBP20.06■□□□□ 0.8
CXXC4-201ENST00000394767 TRIM56Q9BRZ2 755 aaKnown RBP20.06■□□□□ 0.8
CXXC4-201ENST00000394767 STXBP5LQ9Y2K9 1186 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 RAMP2O60895 175 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 KRT38O76015 456 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 RFC2P35250 354 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 IRX4P78413 519 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 COL24A1Q17RW2 1714 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 C11orf84Q9BUA3 381 aaPredicted RBP20.06■□□□□ 0.8
CXXC4-201ENST00000394767 A6NNZ2 444 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 EBAG9O00559 213 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 TUBB8Q3ZCM7 444 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 SLC39A4Q6P5W5 647 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 EXT2Q93063 718 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 ACBD6Q9BR61 282 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 CNGB3Q9NQW8 809 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 MYH6P13533 1939 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 E5RI56 91 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 AP3B1O00203 1094 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 TLR5O60602 858 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 ASMTLO95671 621 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 JCHAINP01591 159 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 KRT35Q92764 455 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 KAT2BQ92831 832 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 MED4Q9NPJ6 270 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
CXXC4-201ENST00000394767 AMPD1P23109 780 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 CASP8Q14790 479 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 MAST2Q6P0Q8 1798 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 MYH8P13535 1937 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 MTA1Q13330 715 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 FBF1Q8TES7 1133 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 AGO3Q9H9G7 860 aaKnown RBP20.05■□□□□ 0.8
CXXC4-201ENST00000394767 APOBEC3GQ9HC16 384 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms