RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 MMADHCQ9H3L0 296 aaPredicted RBP19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 USP29Q9HBJ7 922 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 SIX4Q9UIU6 781 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 H7C0C1 242 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 CAPN9O14815 690 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 PEX19P40855 299 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 GABRB2P47870 512 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 ATP5OP48047 213 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 CBLBQ13191 982 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 HSF5Q4G112 596 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 ZNF667Q5HYK9 610 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 FAM160B1Q5W0V3 765 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 CES4AQ5XG92 561 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 TRNP1Q6NT89 227 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 C1orf228Q6PIY5 440 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 MPZL3Q6UWV2 235 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 CDR2LQ86X02 465 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 ZBTB8OSQ8IWT0 167 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 CTAGE3PQ8IX95 158 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 LRRC71Q8N4P6 559 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 FGD4Q96M96 766 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 SYT15Q9BQS2 421 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 ELOVL4Q9GZR5 314 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 SMYD3Q9H7B4 428 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 PLAC1Q9HBJ0 212 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 RAB6BQ9NRW1 208 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 ASNSD1Q9NWL6 643 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 LRRC37A2A6NM11 1700 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 TBX10O75333 385 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 IRX1P78414 480 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 PTPN11Q06124 597 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 SLC34A1Q06495 639 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 FAM102AQ5T9C2 384 aaPredicted RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 LRRC74BQ6ZQY2 392 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 EP400NLQ6ZTU2 488 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 SAPCD2Q86UD0 394 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 ADPGKQ9BRR6 497 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 IQCGQ9H095 443 aaKnown RBP19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 PTPRHQ9HD43 1115 aa19.06■□□□□ 0.64
PCDHA1-202ENST00000394633 TCF7P36402 384 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 CPA2P48052 419 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 MRPS5P82675 430 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 OCRLQ01968 901 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 LBRQ14739 615 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 EEF1DP3Q658K8 133 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 SMYD5Q6GMV2 418 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 RASAL3Q86YV0 1011 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 TMEM192Q8IY95 271 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 SCG3Q8WXD2 468 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 ZNF668Q96K58 619 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 POPDC2Q9HBU9 364 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 SMYD2Q9NRG4 433 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 PAK5Q9P286 719 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 PLLPQ9Y342 182 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 M0QYV0 167 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 B4GALT5O43286 388 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 SLC25A27O95847 323 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 SNRPAP09012 282 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 CXCL8P10145 99 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 ZNF157P51786 506 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 ZNF143P52747 638 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 BST1Q10588 318 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 TFDP2Q14188 446 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 FAXCQ5TGI0 409 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 TMEM154Q6P9G4 183 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 TSHZ1Q6ZSZ6 1077 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 TREML1Q86YW5 311 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 DTX3LQ8TDB6 740 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 KCNK4Q9NYG8 393 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 ZNF180Q9UJW8 692 aa19.05■□□□□ 0.64
PCDHA1-202ENST00000394633 CAPN14A8MX76 684 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 KCNN4O15554 427 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 GPD1P21695 349 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 PGM1P36871 562 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 GPD2P43304 727 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 C15orf59Q2T9L4 293 aaPredicted RBP19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 FAM47CQ5HY64 1035 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 ATF7IP2Q5U623 682 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 ANKRD23Q86SG2 305 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 CAND1Q86VP6 1230 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 C1orf127Q8N9H9 656 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 UCMAQ8WVF2 138 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 C7orf26Q96N11 449 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 RNF157Q96PX1 679 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 ZNF395Q9H8N7 513 aaPredicted RBP19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 STX18Q9P2W9 335 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 PPME1Q9Y570 386 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 HTTP42858 3142 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 PIK3R2O00459 728 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 PPP1R12AO14974 1030 aaPredicted RBP19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 UGT1A9O60656 530 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 RFPL1O75677 317 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 KRT37O76014 449 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 PRKCHP24723 683 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 CCNFP41002 786 aa19.04■□□□□ 0.64
PCDHA1-202ENST00000394633 MXD4Q14582 209 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms