RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TMEM132CQ8N3T6 1108 aa13.8□□□□□ -0.2
USP49-203ENST00000394253 KDM5BQ9UGL1 1544 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 CLOCKO15516 846 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 GLRA3O75311 464 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 VPS4BO75351 444 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 CPA2P48052 419 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 ITGA9Q13797 1035 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 NCAPD2Q15021 1401 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 IGF1RP08069 1367 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 TCEA3O75764 348 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 ATP6V1G2O95670 118 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 FDFT1P37268 417 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 SLC18A3Q16572 532 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 DAW1Q8N136 415 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 ZNF285Q96NJ3 590 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 STK33Q9BYT3 514 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 AHSPQ9NZD4 102 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 CHORDC1Q9UHD1 332 aaPredicted RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 SNAP91O60641 907 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 PRG2P13727 222 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 GSTM5P46439 218 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 OR52L1Q8NGH7 329 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 PLGRKTQ9HBL7 147 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 TMCO1Q9UM00 188 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 BMP3P12645 472 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 PAX7P23759 505 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 SLC34A1Q06495 639 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 BROXQ5VW32 411 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 LRRC69Q6ZNQ3 347 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 MND1Q9BWT6 205 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 PRKAG3Q9UGI9 489 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 SSTP61278 116 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 EZH2Q15910 746 aaKnown RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 ZNF224Q9NZL3 707 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 RGS14O43566 566 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 MYL9P24844 172 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 MTMR1Q13613 665 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 CKLFQ9UBR5 152 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 ERGIC3Q9Y282 383 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 TELO2Q9Y4R8 837 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 COMMD3-BMI1R4GMX3 469 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 SLC44A2Q8IWA5 706 aaPredicted RBP13.79□□□□□ -0.2
USP49-203ENST00000394253 EFR3BQ9Y2G0 817 aa13.79□□□□□ -0.2
USP49-203ENST00000394253 IQCMA0A1B0GVH7 501 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ZBTB22O15209 634 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ERVK-10P10266 1014 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 MRNIPQ6NTE8 343 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 STOX1Q6ZVD7 989 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 RASSF1Q9NS23 344 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 KCNIP3Q9Y2W7 256 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ANXA9O76027 345 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 RAPGEF3O95398 923 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 SMAD1Q15797 465 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 ALG11Q2TAA5 492 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 TDRD5Q8NAT2 981 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 ABCB10Q9NRK6 738 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 CLN6Q9NWW5 311 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 CHN2P52757 468 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 GRIK3Q13003 919 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 SAMD4BQ5PRF9 694 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 AADATQ8N5Z0 425 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 NSUN7Q8NE18 718 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 MAGEE2Q8TD90 523 aaPredicted RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 ERP44Q9BS26 406 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 METTL5Q9NRN9 209 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 C15orf41Q9Y2V0 281 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 HS6ST1O60243 411 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 MARK2Q7KZI7 788 aaKnown RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 POC5Q8NA72 575 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 TPD52L3Q96J77 140 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 MARK1Q9P0L2 795 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 RAPGEFL1Q9UHV5 662 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 LNPEPQ9UIQ6 1025 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 INPP4BO15327 924 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 NCK2O43639 380 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 ZNF432O94892 652 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 SULT1E1P49888 294 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 GTF2IP78347 998 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 KDELC2Q7Z4H8 507 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 C8orf59Q8N0T1 100 aaPredicted RBP13.78□□□□□ -0.2
USP49-203ENST00000394253 GORASP1Q9BQQ3 440 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 FBXO40Q9UH90 709 aa13.78□□□□□ -0.2
USP49-203ENST00000394253 HSD3B1P14060 373 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms