RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 PAPD7Q5XG87 772 aaKnown RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 ZNF425Q6IV72 752 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 KRT28Q7Z3Y7 464 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 ZNF398Q8TD17 642 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 PNISRQ8TF01 805 aaKnown RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 IQCDQ96DY2 449 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 LRRC46Q96FV0 321 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 PRR11Q96HE9 360 aaPredicted RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 CCDC17Q96LX7 622 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 FAM227BQ96M60 508 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 FYTTD1Q96QD9 318 aaKnown RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 EFHD1Q9BUP0 239 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 NAA15Q9BXJ9 866 aaKnown RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 SNX15Q9NRS6 342 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 KLHL13Q9P2N7 655 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 NKX1-2Q9UD57 310 aaPredicted RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 STEAP1Q9UHE8 339 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 SCAF8Q9UPN6 1271 aaKnown RBP3.83□□□□□ -1.8
MDM2-208ENST00000393410 WDR17Q8IZU2 1322 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 COL15A1P39059 1388 aa3.83□□□□□ -1.8
MDM2-208ENST00000393410 CYP2D7A0A087X1C5 515 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 CLCA1A8K7I4 914 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 A8MVJ9 347 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 KCNU1A8MYU2 1149 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 UBE2Q2LH0YL09 131 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 H3BNC9 293 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 FOXN3O00409 490 aaPredicted RBP3.82□□□□□ -1.8
MDM2-208ENST00000393410 AREL1O15033 823 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 PMM2O15305 246 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 THAP12O43422 761 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 BCAR3O75815 825 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 USP1O94782 785 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 ARP10275 920 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 TRIM27P14373 513 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 FGFR2P21802 821 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 YY1P25490 414 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 RBL1P28749 1068 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 ATICP31939 592 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 EIF4A1P60842 406 aaKnown RBP3.82□□□□□ -1.8
MDM2-208ENST00000393410 GPC5P78333 572 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 CFHR3Q02985 330 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 LARS2Q15031 903 aaKnown RBP3.82□□□□□ -1.8
MDM2-208ENST00000393410 SAFBQ15424 915 aaKnown RBP eCLIP3.82□□□□□ -1.8
MDM2-208ENST00000393410 CERKLQ49MI3 558 aaPredicted RBP3.82□□□□□ -1.8
MDM2-208ENST00000393410 LRCH2Q5VUJ6 765 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 MORN5Q5VZ52 161 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 C11orf87Q6NUJ2 197 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 MZT2AQ6P582 158 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 CRTC1Q6UUV9 634 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 ZNF813Q6ZN06 617 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 PNPLA1Q8N8W4 532 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 SUN3Q8TAQ9 357 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 CHMP4AQ9BY43 222 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 PRSS22Q9GZN4 317 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 SLC25A32Q9H2D1 315 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 HEYLQ9NQ87 328 aaPredicted RBP3.82□□□□□ -1.8
MDM2-208ENST00000393410 GAR1Q9NY12 217 aaKnown RBP3.82□□□□□ -1.8
MDM2-208ENST00000393410 MYO1AQ9UBC5 1043 aa3.82□□□□□ -1.8
MDM2-208ENST00000393410 A0A1W2PPC4 97 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 FCHO1O14526 889 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 KIF3BO15066 747 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 SNX2O60749 519 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 PRAMEF2O60811 474 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 CBFA2T3O75081 653 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 MBPP02686 304 aaPredicted RBP3.81□□□□□ -1.8
MDM2-208ENST00000393410 MYL3P08590 195 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 CD19P15391 556 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 PHKG2P15735 406 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 ADRA1DP25100 572 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 GNALP38405 381 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 STT3AP46977 705 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 CLCA4Q14CN2 919 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 ACOX1Q15067 660 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 ETFDHQ16134 617 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 MEX3CQ5U5Q3 659 aaKnown RBP3.81□□□□□ -1.8
MDM2-208ENST00000393410 ABLIM2Q6H8Q1 611 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 MIS18BP1Q6P0N0 1132 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 TMEM65Q6PI78 240 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 DCDC5Q6ZRR9 648 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 KIAA0408Q6ZU52 694 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 CNGA4Q8IV77 575 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 CCDC33Q8N5R6 958 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 C12orf76Q8N812 135 aaPredicted RBP3.81□□□□□ -1.8
MDM2-208ENST00000393410 PJA1Q8NG27 643 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 MBD3L2Q8NHZ7 208 aaPredicted RBP3.81□□□□□ -1.8
MDM2-208ENST00000393410 SCARB1Q8WTV0 552 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 SMG7Q92540 1137 aaKnown RBP3.81□□□□□ -1.8
MDM2-208ENST00000393410 GDF15Q99988 308 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 SPRTNQ9H040 489 aaPredicted RBP3.81□□□□□ -1.8
MDM2-208ENST00000393410 SAP30LQ9HAJ7 183 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 NRIP3Q9NQ35 241 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 VPS45Q9NRW7 570 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 FZD4Q9ULV1 537 aa3.81□□□□□ -1.8
MDM2-208ENST00000393410 TMEM232C9JQI7 657 aa3.8□□□□□ -1.8
MDM2-208ENST00000393410 CLIC1O00299 241 aa3.8□□□□□ -1.8
MDM2-208ENST00000393410 FYB1O15117 783 aa3.8□□□□□ -1.8
MDM2-208ENST00000393410 KCNQ3O43525 872 aa3.8□□□□□ -1.8
MDM2-208ENST00000393410 NCK2O43639 380 aa3.8□□□□□ -1.8
MDM2-208ENST00000393410 WDR47O94967 919 aa3.8□□□□□ -1.8
MDM2-208ENST00000393410 TOP3BO95985 862 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms