RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 TYMPP19971 482 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 NOS2P35228 1153 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 ATP11AP98196 1134 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 TBL3Q12788 808 aaKnown RBP8.45□□□□□ -1.06
LIMS1-203ENST00000393310 LONRF1Q17RB8 773 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 ZSCAN18Q8TBC5 510 aaPredicted RBP8.45□□□□□ -1.06
LIMS1-203ENST00000393310 OMA1Q96E52 524 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 AK8Q96MA6 479 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 SIKE1Q9BRV8 207 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 C2orf49Q9BVC5 232 aaPredicted RBP8.45□□□□□ -1.06
LIMS1-203ENST00000393310 ARRDC1-AS1Q9H2J1 176 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 RNF39Q9H2S5 420 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 POMKQ9H5K3 350 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 GDF3Q9NR23 364 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 RMND1Q9NWS8 449 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 SCOCQ9UIL1 159 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 STK38LQ9Y2H1 464 aa8.45□□□□□ -1.06
LIMS1-203ENST00000393310 A0A1B0GTW7 788 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 MEIS1O00470 390 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 RHOP08100 348 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SP9P0CG40 484 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 EPCAMP16422 314 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 KELP23276 732 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 BLKP51451 505 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 CCDC184Q52MB2 194 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 PIP4K2CQ8TBX8 421 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 RAPGEF5Q92565 580 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 PARVGQ9HBI0 331 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 CYLDQ9NQC7 956 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 VPS54Q9P1Q0 977 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SH3D21A4FU49 640 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SYNDIG1LA6NDD5 238 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SNTNA6NMZ2 147 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 F8W810 466 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 FNTBP49356 437 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 CENPAP49450 140 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 TWF1Q12792 350 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 HIC1Q14526 733 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 GEN1Q17RS7 908 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 RBM20Q5T481 1227 aaKnown RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 ESRP1Q6NXG1 681 aaKnown RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 APOA5Q6Q788 366 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 MPZL3Q6UWV2 235 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 EID3Q8N140 333 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 ZNF461Q8TAF7 563 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 DDI1Q8WTU0 396 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 LRRC46Q96FV0 321 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 IL12RB2Q99665 862 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SELENOOQ9BVL4 669 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 THSD1Q9NS62 852 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 DCAF16Q9NXF7 216 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 FBXO10Q9UK96 956 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 NUMBLQ9Y6R0 609 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 CUL9Q8IWT3 2517 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 COL11A2P13942 1736 aaPredicted RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 HEPACAM2A8MVW5 462 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 N4BP1O75113 896 aaKnown RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 RPN1P04843 607 aaKnown RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SPATA31D3P0C874 917 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 IFNAR1P17181 557 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 DDX5P17844 614 aaKnown RBP8.44□□□□□ -1.06
LIMS1-203ENST00000393310 ETFBP38117 255 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 ASIC1P78348 528 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SNX1Q13596 522 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 FGL2Q14314 439 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 HSP90AA4PQ58FG1 418 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 STPG1Q5TH74 334 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SFMBT2Q5VUG0 894 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 SPATA31D4Q6ZUB0 917 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 TEX9Q8N6V9 391 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 CLEC4DQ8WXI8 215 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 ELSPBP1Q96BH3 223 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 DYDC2Q96IM9 177 aa8.44□□□□□ -1.06
LIMS1-203ENST00000393310 TEX28O15482 410 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 NDUFB5O43674 189 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SGTAO43765 313 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 GCNT3O95395 438 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 HNRNPH1P31943 449 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 RPS9P46781 194 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SCRN3Q0VDG4 424 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 KLHL40Q2TBA0 621 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ARMC6Q6NXE6 501 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 FGD4Q96M96 766 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CLSTN3Q9BQT9 956 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ELOVL4Q9GZR5 314 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 STMN4Q9H169 189 aaPredicted RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CUEDC2Q9H467 287 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ABCF3Q9NUQ8 709 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SSC5DA1L4H1 1573 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SULT1B1O43704 296 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 AKR1B10O60218 316 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 TUBBP07437 444 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CA4P22748 312 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CLK1P49759 484 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CORO7P57737 925 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms