RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TXNRD2Q9NNW7 524 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 TRIM33Q9UPN9 1127 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 MRPL42Q9Y6G3 142 aaKnown RBP10.93□□□□□ -0.66
CALD1-203ENST00000393118 APOC4-APOC2K7ER74 178 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 FZD9O00144 591 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 ATP6V1G1O75348 118 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 APOC2P02655 101 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 CCDC130P13994 396 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 CDKN2BP42772 138 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 GRIK3Q13003 919 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 DPYSL3Q14195 570 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 PAN2Q504Q3 1202 aaKnown RBP10.93□□□□□ -0.66
CALD1-203ENST00000393118 PRAMEF19Q5SWL8 479 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 LRRC38Q5VT99 294 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 HIPK4Q8NE63 616 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 ATXN2LQ8WWM7 1075 aaKnown RBP10.93□□□□□ -0.66
CALD1-203ENST00000393118 ELOVL4Q9GZR5 314 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 MMADHCQ9H3L0 296 aaPredicted RBP10.93□□□□□ -0.66
CALD1-203ENST00000393118 DPPA5A6NC42 116 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SUPT3HO75486 399 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ZWINTO95229 277 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 C6orf222P0C671 652 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 GARSP41250 739 aaKnown RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 SLC12A2P55011 1212 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 KDSRQ06136 332 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 GEN1Q17RS7 908 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 KBTBD12Q3ZCT8 623 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SH3PXD2AQ5TCZ1 1133 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ANKRD22Q5VYY1 191 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 NLRP9Q7RTR0 991 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 PLPPR4Q7Z2D5 763 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 DNAJB3Q8WWF6 145 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 PCYT2Q99447 389 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 TIMM13Q9Y5L4 95 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 SNRPAP09012 282 aaKnown RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 TYK2P29597 1187 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ATICP31939 592 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 GDF10P55107 478 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 MTDHQ86UE4 582 aaKnown RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 ST13P4Q8IZP2 240 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 C2orf69Q8N8R5 385 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SLC7A14Q8TBB6 771 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SEC14L1Q92503 715 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SLC24A2Q9UI40 661 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 AP4E1Q9UPM8 1137 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 FIS1Q9Y3D6 152 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 PDE4DIPQ5VU43 2346 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 CNTNAP2Q9UHC6 1331 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ADAMTSL1Q8N6G6 1762 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SRRM3A6NNA2 597 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 A8MUI8 341 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 GRIN3BO60391 1043 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 RTN3O95197 1032 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 SRGAP2BP0DMP2 458 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 BGNP21810 368 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 CYP2F1P24903 491 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 FAAP100Q0VG06 881 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 TMCO4Q5TGY1 634 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 MFSD5Q6N075 450 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 BBS12Q6ZW61 710 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ARID3BQ8IVW6 561 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 HEY2Q9UBP5 337 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 SCN9AQ15858 1988 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 M0QYT0 321 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 DNAJC8O75937 253 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 CBX6O95503 412 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 MOCS2O96007 188 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 HOXC6P09630 235 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 FAM200BP0CF97 657 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 AMPD1P23109 780 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ADAM32Q8TC27 787 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 USP33Q8TEY7 942 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 ALKBH8Q96BT7 664 aaKnown RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 ZBED3Q96IU2 234 aaPredicted RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 ITGA11Q9UKX5 1188 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 DRG1Q9Y295 367 aaKnown RBP10.92□□□□□ -0.66
CALD1-203ENST00000393118 RREB1Q92766 1687 aa10.92□□□□□ -0.66
CALD1-203ENST00000393118 H3BRJ5 948 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 B4GALT4O60513 344 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 ATP5HO75947 161 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 ENO1P06733 434 aaKnown RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 ITGAVP06756 1048 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 ALDH18A1P54886 795 aaKnown RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 SH3BGRP55822 239 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 PPP1R26Q5T8A7 1209 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 SLC2A14Q8TDB8 520 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 RXFP1Q9HBX9 757 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 CPA4Q9UI42 421 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 KAT6AQ92794 2004 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 DNAJC6O75061 913 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 RECQL4O94761 1208 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 ZFXP17010 805 aaPredicted RBP10.91□□□□□ -0.66
CALD1-203ENST00000393118 NUMBP49757 651 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 ARPP19P56211 112 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 MAP3K10Q02779 954 aa10.91□□□□□ -0.66
CALD1-203ENST00000393118 GAD2Q05329 585 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms