RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ZNF394Q53GI3 561 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 EOGTQ5NDL2 527 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 PMS2CLQ68D20 193 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 RNF43Q68DV7 783 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 CLEC20AQ6ZU45 233 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 INTS8Q75QN2 995 aaKnown RBP11.3□□□□□ -0.6
TRAV4-201ENST00000390426 ETFBKMTQ8IXQ9 262 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 GUF1Q8N442 669 aaKnown RBP11.3□□□□□ -0.6
TRAV4-201ENST00000390426 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 NT5C1AQ9BXI3 368 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 IMPG2Q9BZV3 1241 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 CYP3A43Q9HB55 503 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 NMUR1Q9HB89 426 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 POLMQ9NP87 494 aaPredicted RBP11.3□□□□□ -0.6
TRAV4-201ENST00000390426 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAV4-201ENST00000390426 DEC1Q9P2X7 70 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 NUDT5Q9UKK9 219 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 SCML2Q9UQR0 700 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 MYOFQ9NZM1 2061 aa11.3□□□□□ -0.6
TRAV4-201ENST00000390426 CNOT1A5YKK6 2376 aaKnown RBP11.3□□□□□ -0.6
TRAV4-201ENST00000390426 ABCA7Q8IZY2 2146 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 A0A1W2PQH9 124 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 TCRBV21S2A2A0A5A6 115 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 C4orf47A7E2U8 309 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 MAP3K13O43283 966 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 GREM1O60565 184 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 ADAM23O75077 832 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 CILPO75339 1184 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 ZNF202O95125 648 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 RARGP13631 454 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 ATP5C1P36542 298 aaKnown RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 P2RY2P41231 377 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 HSF5Q4G112 596 aaPredicted RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 C10orf76Q5T2E6 689 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 N4BP2L1Q5TBK1 243 aaPredicted RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 TPGS1Q6ZTW0 290 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 HTR3DQ70Z44 454 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 CYP2U1Q7Z449 544 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 C11orf74Q86VG3 221 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 SMYD4Q8IYR2 804 aaPredicted RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 FRMD1Q8N878 549 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 ZNF513Q8N8E2 541 aaPredicted RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 TERB1Q8NA31 727 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 OLIG1Q8TAK6 271 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 PIGKQ92643 395 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 SEMA4DQ92854 862 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 EEF2KMTQ96G04 330 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 EDEM2Q9BV94 578 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 SCAND2PQ9GZW5 306 aaPredicted RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 TMEM8AQ9HCN3 771 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
TRAV4-201ENST00000390426 HCN2Q9UL51 889 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 KIAA1549LQ6ZVL6 1849 aa11.29□□□□□ -0.6
TRAV4-201ENST00000390426 ACACBO00763 2458 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 PATE3B3GLJ2 98 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 NEDD8-MDP1E9PL57 170 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 KHNYNO15037 678 aaKnown RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 GOLGA8FQ08AF8 430 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 GOLGA8DPQ0D2H9 430 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 PREPLQ4J6C6 727 aaPredicted RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 C10orf120Q5SQS8 335 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 GRAMD4Q6IC98 578 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 ARMCX6Q7L4S7 300 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 TMEFF1Q8IYR6 380 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 CCDC150Q8NCX0 1101 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 ERLEC1Q96DZ1 483 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 HEXIM2Q96MH2 286 aaKnown RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 LSM14BQ9BX40 385 aaKnown RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 BBS2Q9BXC9 721 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 CYLDQ9NQC7 956 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 MBD1Q9UIS9 605 aaPredicted RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 NAGPAQ9UK23 515 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
TRAV4-201ENST00000390426 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
TRAV4-201ENST00000390426 DNAH14Q0VDD8 3507 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 LNP1A1A4G5 178 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 KCNK5O95279 499 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 TYRP14679 529 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 GTF2H1P32780 548 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 PLA2G4AP47712 749 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 KIF11P52732 1056 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 IRX4P78413 519 aa11.27□□□□□ -0.61
TRAV4-201ENST00000390426 ENPEPQ07075 957 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms