RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SUSD2Q9UGT4 822 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 SLCO1B1Q9Y6L6 691 aa12.54□□□□□ -0.4
SOD1-202ENST00000389995 A0A1B0GTW7 788 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 KCNJ18B7U540 433 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 CILPO75339 1184 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 WARSP23381 471 aaKnown RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 YWHAQP27348 245 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 ITPKBP27987 946 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 ABCD1P33897 745 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 GNL1P36915 607 aaPredicted RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 C19orf57Q0VDD7 668 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 MAPRE1Q15691 268 aaKnown RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 HLA-BQ31612 363 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 WDR45BQ5MNZ6 344 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 L1TD1Q5T7N2 865 aaKnown RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 SDE2Q6IQ49 451 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 TPGS1Q6ZTW0 290 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 CACUL1Q86Y37 369 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 OR6B3Q8NGW1 331 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 BAHD1Q8TBE0 780 aaPredicted RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 FBXO32Q969P5 355 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 AK8Q96MA6 479 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 ACCSQ96QU6 501 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 GABRG3Q99928 467 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 B3GNT5Q9BYG0 378 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 INTS13Q9NVM9 706 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 EHD2Q9NZN4 543 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
SOD1-202ENST00000389995 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.53□□□□□ -0.4
SOD1-202ENST00000389995 STARD13Q9Y3M8 1113 aa12.53□□□□□ -0.4
SOD1-202ENST00000389995 KCNK3O14649 394 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 GCNT3O95395 438 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 NCAM1P13591 858 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 TYRP14679 529 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 PTPN1P18031 435 aaKnown RBP12.52□□□□□ -0.41
SOD1-202ENST00000389995 CD6P30203 668 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 MATKP42679 507 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 CLDN6P56747 220 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 HECTD3Q5T447 861 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 DCAF12L1Q5VU92 463 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 DPH6Q7L8W6 267 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 SYCP3Q8IZU3 236 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 NUP93Q8N1F7 819 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 DNASE2BQ8WZ79 361 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 FOXJ1Q92949 421 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 OTUB2Q96DC9 234 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 ANKRD36BP1Q96IX9 119 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.41
SOD1-202ENST00000389995 CEP295NLQ96MC4 621 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 BBS2Q9BXC9 721 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 SNX25Q9H3E2 840 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 PLK2Q9NYY3 685 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 GMIPQ9P107 970 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 DKK4Q9UBT3 224 aa12.52□□□□□ -0.41
SOD1-202ENST00000389995 EIF2B4Q9UI10 523 aaKnown RBP12.52□□□□□ -0.41
SOD1-202ENST00000389995 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
SOD1-202ENST00000389995 A0A087WV48 116 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 A0A1B0GVT2 93 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 PRPF6O94906 941 aaKnown RBP12.51□□□□□ -0.41
SOD1-202ENST00000389995 DKK1O94907 266 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 TBX18O95935 607 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
SOD1-202ENST00000389995 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
SOD1-202ENST00000389995 TNNC2P02585 160 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 GARTP22102 1010 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 FUT11Q495W5 492 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 ELMO3Q96BJ8 720 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 MKRN2Q9H000 416 aaKnown RBP12.51□□□□□ -0.41
SOD1-202ENST00000389995 WSB2Q9NYS7 404 aaPredicted RBP12.51□□□□□ -0.41
SOD1-202ENST00000389995 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
SOD1-202ENST00000389995 DOCK9Q9BZ29 2069 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
SOD1-202ENST00000389995 SLC26A4O43511 780 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 CACNG3O60359 315 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 GREM1O60565 184 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 CER1O95813 267 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 CISD3P0C7P0 127 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 ABCG1P45844 678 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 CSNK1EP49674 416 aaKnown RBP12.5□□□□□ -0.41
SOD1-202ENST00000389995 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
SOD1-202ENST00000389995 DHRS13Q6UX07 377 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
SOD1-202ENST00000389995 FAM124AQ86V42 546 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms