RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CERS5Q8N5B7 392 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 C12orf50Q8NA57 414 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 BTBD7Q9P203 1132 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 WDR27A2RRH5 827 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 HNRNPRO43390 633 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 TBX10O75333 385 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 LYPLA1O75608 230 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 APOC2P02655 101 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 FESP07332 822 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 TGM2P21980 687 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 ABCG1P45844 678 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 HSPA13P48723 471 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 CRADDP78560 199 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 FOXD4Q12950 439 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 PTK2BQ14289 1009 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 ACAP1Q15027 740 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 CYP1B1Q16678 543 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 KCTD21Q4G0X4 260 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 TFB1MQ8WVM0 346 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 PKD2L2Q9NZM6 624 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 NOCTQ9UK39 431 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 ANGPT2O15123 496 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 OGTO15294 1046 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 SH3BP5O60239 455 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 OATP04181 439 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 ITGB5P18084 799 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 AMPD1P23109 780 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 SERPINB8P50452 374 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 SLC15A2Q16348 729 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 NRF1Q16656 503 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 UBAP2Q5T6F2 1119 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 GPR141Q7Z602 305 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 STRA8Q7Z7C7 330 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 HELQQ8TDG4 1101 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 EZH1Q92800 747 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 PTPRN2Q92932 1015 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 HPDLQ96IR7 371 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 TMEM79Q9BSE2 394 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
TRAPPC9-201ENST00000389328 KDM1AO60341 852 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 TNFAIP8O95379 198 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ITGAVP06756 1048 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 HOXD13P35453 343 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 MSX2P35548 267 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 RGS2P41220 211 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 PTGER2P43116 358 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 INPP5AQ14642 412 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ITPRIPL1Q6GPH6 555 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 RBM44Q6ZP01 1051 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 NACA2Q9H009 215 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 SPC25Q9HBM1 224 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 MYH2Q9UKX2 1941 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ALDH1A3P47895 512 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 NFIL3Q16649 462 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 TDRD10Q5VZ19 366 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 LPAR1Q92633 364 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 MKL1Q969V6 931 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 SEMA6AQ9H2E6 1030 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 CHEK2O96017 543 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 PSEN1P49768 467 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 TMEM132DQ14C87 1099 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 LIN52Q52LA3 116 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 GALNT15Q8N3T1 639 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 IL31RAQ8NI17 732 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 C10orf82Q8WW14 230 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ELMO2Q96JJ3 720 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 CAMTA1Q9Y6Y1 1673 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 CYB561D2O14569 222 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 SRP72O76094 671 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 RBP5P82980 135 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAM182AQ5T1J6 154 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ANKRD22Q5VYY1 191 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 B3GNT6Q6ZMB0 384 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 ZBTB49Q6ZSB9 765 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 NCLNQ969V3 563 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 HOXC10Q9NYD6 342 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
TRAPPC9-201ENST00000389328 HUS1O60921 280 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 TPI1P60174 286 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 PTPN11Q06124 597 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 NSUN2Q08J23 767 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 FNBP1LQ5T0N5 605 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 FAXDC2Q96IV6 333 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 PLA2G4CQ9UP65 541 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 DFFAO00273 331 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 CCNB1P14635 433 aa13.55□□□□□ -0.24
TRAPPC9-201ENST00000389328 VAV1P15498 845 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms