RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
SHOX-202ENST00000381575 ADAM23O75077 832 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 CILPO75339 1184 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 GRIA2P42262 883 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 WASP42768 502 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 KIR2DL1P43626 348 aaPredicted RBP14.94□□□□□ -0.02
SHOX-202ENST00000381575 TUBP50607 506 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 CRY1Q16526 586 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 PLA2G2CQ5R387 149 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 PPP1R26Q5T8A7 1209 aaPredicted RBP14.94□□□□□ -0.02
SHOX-202ENST00000381575 FRMD1Q8N878 549 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 BHMTQ93088 406 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 FBXO44Q9H4M3 255 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 TMEM8AQ9HCN3 771 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 SPHK2Q9NRA0 654 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 ATP6V1DQ9Y5K8 247 aa14.94□□□□□ -0.02
SHOX-202ENST00000381575 USP24Q9UPU5 2620 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 CACNA1EQ15878 2313 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 TBC1D3BA6NDS4 549 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 GREM1O60565 184 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 TULP3O75386 442 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 RPL13P26373 211 aaKnown RBP14.93□□□□□ -0.02
SHOX-202ENST00000381575 EIF2DP41214 584 aaKnown RBP14.93□□□□□ -0.02
SHOX-202ENST00000381575 MXI1P50539 228 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 MRPS21P82921 87 aaKnown RBP14.93□□□□□ -0.02
SHOX-202ENST00000381575 GAD2Q05329 585 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 USP39Q53GS9 565 aaKnown RBP14.93□□□□□ -0.02
SHOX-202ENST00000381575 BTBD8Q5XKL5 378 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 IL31Q6EBC2 164 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 TPGS1Q6ZTW0 290 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 RASSF3Q86WH2 238 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 ETFBKMTQ8IXQ9 262 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 KIAA1958Q8N8K9 716 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 HMGB4Q8WW32 186 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 CNOT6LQ96LI5 555 aaKnown RBP14.93□□□□□ -0.02
SHOX-202ENST00000381575 CNTNAP3BQ96NU0 1288 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 KLF16Q9BXK1 252 aaPredicted RBP14.93□□□□□ -0.02
SHOX-202ENST00000381575 CNTNAP3Q9BZ76 1288 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 CYP3A43Q9HB55 503 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 COMMD8Q9NX08 183 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 NAGPAQ9UK23 515 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 SCML2Q9UQR0 700 aa14.93□□□□□ -0.02
SHOX-202ENST00000381575 KMT2BQ9UMN6 2715 aaPredicted RBP14.92□□□□□ -0.02
SHOX-202ENST00000381575 NEDD8-MDP1E9PL57 170 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 HOXC11O43248 304 aaPredicted RBP14.92□□□□□ -0.02
SHOX-202ENST00000381575 RHOBTB1O94844 696 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 CAVIN2O95810 425 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 RARGP13631 454 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 PRCPP42785 496 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 C10orf120Q5SQS8 335 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 STPG1Q5TH74 334 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 TCERG1LQ5VWI1 586 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 PMS2CLQ68D20 193 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 KRT39Q6A163 491 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 ARMCX6Q7L4S7 300 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 SCD5Q86SK9 330 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 CCDC150Q8NCX0 1101 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 CCDC26Q8TAB7 109 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 TATDN2Q93075 761 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 OTUB2Q96DC9 234 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 HEXIM2Q96MH2 286 aaKnown RBP14.92□□□□□ -0.02
SHOX-202ENST00000381575 DNAJC17Q9NVM6 304 aaKnown RBP14.92□□□□□ -0.02
SHOX-202ENST00000381575 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHOX-202ENST00000381575 DEC1Q9P2X7 70 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 HCN2Q9UL51 889 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 PCDHGA5Q9Y5G8 931 aa14.92□□□□□ -0.02
SHOX-202ENST00000381575 TCRBV21S2A2A0A5A6 115 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 BCLAF3A2AJT9 711 aaKnown RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 TRIM49BA6NDI0 452 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 PATE3B3GLJ2 98 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 HMBSP08397 361 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 EPB41P11171 864 aaKnown RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 TRIM21P19474 475 aaKnown RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 ATP5C1P36542 298 aaKnown RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 DHPSP49366 369 aaPredicted RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 KIF11P52732 1056 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 PMS1P54277 932 aaKnown RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 EDRF1Q3B7T1 1238 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 CBWD6Q4V339 395 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 DCAF17Q5H9S7 520 aaPredicted RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 CBWD3Q5JTY5 395 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 CBWD5Q5RIA9 395 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 TOGARAM2Q6ZUX3 1019 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 FMR1NBQ8N0W7 255 aaPredicted RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 PGBD3Q8N328 593 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 ZNF513Q8N8E2 541 aaPredicted RBP14.91□□□□□ -0.02
SHOX-202ENST00000381575 TERB1Q8NA31 727 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 SLC4A11Q8NBS3 891 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 P2RY11Q96G91 374 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 BBS2Q9BXC9 721 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 DUSP16Q9BY84 665 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 CYLDQ9NQC7 956 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 VPS45Q9NRW7 570 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 CISHQ9NSE2 258 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHOX-202ENST00000381575 PLK2Q9NYY3 685 aa14.91□□□□□ -0.02
SHOX-202ENST00000381575 CETN3O15182 167 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms