RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.22■□□□□ 0.19
PDGFB-202ENST00000381551 DENND4CQ5VZ89 1909 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 CUL9Q8IWT3 2517 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 OLFM2O95897 454 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 LTFP02788 710 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 CALB1P05937 261 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 GLI1P08151 1106 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 RALAP11233 206 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 WEE1P30291 646 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 GBP2P32456 591 aaPredicted RBP16.21■□□□□ 0.19
PDGFB-202ENST00000381551 BTBD8Q5XKL5 378 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 BEND5Q7L4P6 421 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 PHLDB2Q86SQ0 1253 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 TMEM139Q8IV31 216 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 CCDC170Q8IYT3 715 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 CMTM8Q8IZV2 173 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 ACSF2Q96CM8 615 aaPredicted RBP16.21■□□□□ 0.19
PDGFB-202ENST00000381551 BAG1Q99933 345 aaPredicted RBP16.21■□□□□ 0.19
PDGFB-202ENST00000381551 TRPC7Q9HCX4 862 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 ASNSD1Q9NWL6 643 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 WDR35Q9P2L0 1181 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 EPS15L1Q9UBC2 864 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 STRIP2Q9ULQ0 834 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
PDGFB-202ENST00000381551 DENND4AQ7Z401 1863 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 TRAV19A0A0A6YYK7 116 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 COCHO43405 550 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 TLR5O60602 858 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 TBX18O95935 607 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 SCNN1AP37088 669 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 GSCP56915 257 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-202ENST00000381551 FAM78AQ5JUQ0 283 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 KLHDC10Q6PID8 442 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 ARID3BQ8IVW6 561 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-202ENST00000381551 ARL14EPQ8N8R7 260 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-202ENST00000381551 ZSCAN18Q8TBC5 510 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-202ENST00000381551 EDEM1Q92611 657 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 RPGRIP1Q96KN7 1286 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 POPDC2Q9HBU9 364 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 NUDT5Q9UKK9 219 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 NAALADL1Q9UQQ1 740 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 NR2E1Q9Y466 385 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 EPN1Q9Y6I3 576 aaPredicted RBP16.2■□□□□ 0.18
PDGFB-202ENST00000381551 OBSL1O75147 1896 aa16.2■□□□□ 0.18
PDGFB-202ENST00000381551 TCRBV5S1A1TA0A578 114 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 C2CD4DB7Z1M9 353 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 ZNF263O14978 683 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 HSF2BPO75031 334 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 GRAP2O75791 330 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 LCA5LO95447 670 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 SP100P23497 879 aaPredicted RBP16.19■□□□□ 0.18
PDGFB-202ENST00000381551 RRM1P23921 792 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 ATP5C1P36542 298 aaKnown RBP16.19■□□□□ 0.18
PDGFB-202ENST00000381551 SLC7A9P82251 487 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 SYPL2Q5VXT5 272 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 ARCQ7LC44 396 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 TADA2BQ86TJ2 420 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 PLCD3Q8N3E9 789 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 C3orf20Q8ND61 904 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 SMARCD2Q92925 531 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 ASB16Q96NS5 453 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 SLC2A13Q96QE2 648 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 CDK5RAP1Q96SZ6 601 aaKnown RBP16.19■□□□□ 0.18
PDGFB-202ENST00000381551 TRIM62Q9BVG3 475 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 TRPV4Q9HBA0 871 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 SPTLC3Q9NUV7 552 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 PRKAG3Q9UGI9 489 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 TMEM59LQ9UK28 342 aa16.19■□□□□ 0.18
PDGFB-202ENST00000381551 DOCK8Q8NF50 2099 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 SOWAHDA6NJG2 315 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 SIGLEC16A6NMB1 481 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 LOC730098B7Z3J9 87 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 CKMP06732 381 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 NCAM1P13591 858 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 AVPR1AP37288 418 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 GALCP54803 685 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 C10orf120Q5SQS8 335 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 FAM102AQ5T9C2 384 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-202ENST00000381551 PLEKHA7Q6IQ23 1121 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 LRRC8AQ8IWT6 810 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 ADHFE1Q8IWW8 467 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 ZDHHC14Q8IZN3 488 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 DEFB106AQ8N104 65 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 TDRD5Q8NAT2 981 aaKnown RBP16.18■□□□□ 0.18
PDGFB-202ENST00000381551 RNF139Q8WU17 664 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-202ENST00000381551 SMG9Q9H0W8 520 aaKnown RBP16.18■□□□□ 0.18
PDGFB-202ENST00000381551 TDP1Q9NUW8 608 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 DNMT3LQ9UJW3 386 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 MYO16Q9Y6X6 1858 aa16.18■□□□□ 0.18
PDGFB-202ENST00000381551 A0A0C4DFX4 3053 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 ANKRD62A6NC57 917 aa16.17■□□□□ 0.18
PDGFB-202ENST00000381551 EIF3CLB5ME19 914 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms