RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 TM9SF1O15321 606 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 TIMM44O43615 452 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 SRP72O76094 671 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 DYNC1I2Q13409 638 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 KBTBD12Q3ZCT8 623 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ZRANB3Q5FWF4 1079 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 N4BP2L1Q5TBK1 243 aaPredicted RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 PTRHD1Q6GMV3 140 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 DCP1BQ8IZD4 617 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 TUBGCP3Q96CW5 907 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 CAAP1Q9H8G2 361 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 GOLGA8TH3BQL2 631 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 SNX3O60493 162 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 EIF4BP23588 611 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 ADIGQ0VDE8 80 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 POU6F1Q14863 301 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 TBCCQ15814 346 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 SLC9A9Q8IVB4 645 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 KATNAL2Q8IYT4 538 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 MREGQ8N565 214 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 PRCCQ92733 491 aaPredicted RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 APOL5Q9BWW9 433 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 PORCNQ9H237 461 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 PCDHGB4Q9UN71 923 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 NOL4O94818 638 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 PYGLP06737 847 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 UBA1P22314 1058 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 ATICP31939 592 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 CHKAP35790 457 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 MGAT5Q09328 741 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 BST2Q10589 180 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 CNGA2Q16280 664 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 UGCGQ16739 394 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 SETD3Q86TU7 594 aaPredicted RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 SLITRK1Q96PX8 696 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ACOT9Q9Y305 439 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 CASTOR2A6NHX0 329 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ENDOD1O94919 500 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 F9P00740 461 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 HMGCRP04035 888 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 GHRP10912 638 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ABCG1P45844 678 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ERMARDQ5T6L9 678 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ZCCHC9Q8N567 271 aaKnown RBP17.69■□□□□ 0.42
SGCB-201ENST00000381431 COPS5Q92905 334 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 CEP19Q96LK0 163 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 GPR63Q9BZJ6 419 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 ATXN3LQ9H3M9 355 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 KIF17Q9P2E2 1029 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 PCYOX1Q9UHG3 505 aa17.69■□□□□ 0.42
SGCB-201ENST00000381431 C2CD2LO14523 706 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 RPA3P35244 121 aaPredicted RBP17.68■□□□□ 0.42
SGCB-201ENST00000381431 TDRD10Q5VZ19 366 aaKnown RBP17.68■□□□□ 0.42
SGCB-201ENST00000381431 DTNAQ9Y4J8 743 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 UBIAD1Q9Y5Z9 338 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 C17orf102A2RUQ5 167 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 TMEM247A6NEH6 219 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 AKT1P31749 480 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 TTC23LQ6PF05 361 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 PALB2Q86YC2 1186 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 RNF148Q8N7C7 305 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 RAET1EQ8TD07 263 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 LRRN4Q8WUT4 740 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 CNDP1Q96KN2 507 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 ASB7Q9H672 318 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 ZNF197O14709 1029 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 HIST1H2AGP0C0S8 130 aaPredicted RBP17.68■□□□□ 0.42
SGCB-201ENST00000381431 ACADSP16219 412 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 HIST1H2ADP20671 130 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 MGAT1P26572 445 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 SERPINB8P50452 374 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 SEL1L3Q68CR1 1132 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.68■□□□□ 0.42
SGCB-201ENST00000381431 SLC2A14Q8TDB8 520 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 HIST1H2AHQ96KK5 128 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 HIST1H2AJQ99878 128 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 H2AFJQ9BTM1 129 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
SGCB-201ENST00000381431 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 APOC4-APOC2K7ER74 178 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 KIF1CO43896 1103 aaKnown RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 BANF1O75531 89 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 CELF2O95319 508 aaKnown RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 APOC2P02655 101 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 PTPRAP18433 802 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 KDELR1P24390 212 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 CSHL1Q14406 222 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 C16orf46Q6P387 395 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 DEFB106AQ8N104 65 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 TEKT4Q8WW24 435 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 DNAJB3Q8WWF6 145 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 SLCO1B3Q9NPD5 702 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 STX7O15400 261 aaKnown RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 MLH1P40692 756 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 TNFSF9P41273 254 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 YWHAZP63104 245 aaKnown RBP17.67■□□□□ 0.42
SGCB-201ENST00000381431 STX5Q13190 355 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 DPYSL3Q14195 570 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 ZACNQ401N2 412 aa17.67■□□□□ 0.42
SGCB-201ENST00000381431 AGAP9Q5VTM2 703 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms