RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 TRPC3Q13507 836 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 TLR1Q15399 786 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 TMC7Q7Z402 723 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 ZBTB46Q86UZ6 589 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 TMEM161BQ8NDZ6 487 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 PIWIL2Q8TC59 973 aaKnown RBP11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 PGBD4Q96DM1 585 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 C7orf26Q96N11 449 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 PNPOQ9NVS9 261 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 THAP1Q9NVV9 213 aa11.57□□□□□ -0.56
NPC1L1-202ENST00000381160 TMEM191CA6NGB0 347 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 HSPA4LO95757 839 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 KRT7P08729 469 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 TMEM191BP0C7N4 346 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 SLC1A6P48664 564 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 OGDHQ02218 1023 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 CCNIQ14094 377 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 TDRD10Q5VZ19 366 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 PRR5LQ6MZQ0 368 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 KCNK16Q96T55 309 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 AGO2Q9UKV8 859 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 PLA2G4CQ9UP65 541 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 SPATA31A6Q5VVP1 1343 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 TTLL13PA6NNM8 815 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 H3BSA7 217 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 SIN3BO75182 1162 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 TNFAIP8O95379 198 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 NLRP11P59045 1033 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 CBX3Q13185 183 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 ZFP28Q8NHY6 868 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 CHURC1Q8WUH1 139 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 EME1Q96AY2 570 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 RIT2Q99578 217 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 CCDC106Q9BWC9 280 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 TDRD3Q9H7E2 651 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 ARHGAP26Q9UNA1 814 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 ITM2AO43736 263 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 FAM58BPP0C7Q3 252 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 SAT1P21673 171 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 PRAMEP78395 509 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 ITGA9Q13797 1035 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 GK3PQ14409 553 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 PPP2R5DQ14738 602 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 MTERF2Q49AM1 385 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 GRAMD4Q6IC98 578 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 APOBEC3HQ6NTF7 200 aaKnown RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 ZBTB33Q86T24 672 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 C12orf56Q8IXR9 622 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 IL31RAQ8NI17 732 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 C20orf27Q9GZN8 174 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 XPNPEP1Q9NQW7 623 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 DNAJB4Q9UDY4 337 aa11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 HEMK1Q9Y5R4 338 aaPredicted RBP11.56□□□□□ -0.56
NPC1L1-202ENST00000381160 TCP10L2B9ZVM9 353 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 TRMUO75648 421 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 CCDC92Q53HC0 331 aaPredicted RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 N4BP2L1Q5TBK1 243 aaPredicted RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 FAM196AQ6ZSG2 479 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 PTAR1Q7Z6K3 402 aaPredicted RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 PPWD1Q96BP3 646 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 WDR83Q9BRX9 315 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 MSTO1Q9BUK6 570 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 USP21Q9UK80 565 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 COQ4Q9Y3A0 265 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 NAV1Q8NEY1 1877 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 CCDC166P0CW27 439 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 TAF5Q15542 800 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 MYLK3Q32MK0 819 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 ZNF554Q86TJ5 538 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 MAP4K3Q8IVH8 894 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 NCSTNQ92542 709 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 ZBTB45Q96K62 511 aaPredicted RBP11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 SERPINI1Q99574 410 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 ACSS2Q9NR19 701 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 GRAP2O75791 330 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 BPGMP07738 259 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 PAX3P23760 479 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 CCR3P51677 355 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 LPCAT2Q7L5N7 544 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
NPC1L1-202ENST00000381160 STRA6Q9BX79 667 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms