RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 FAM117BQ6P1L5 589 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 NRCAMQ92823 1304 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 PDHA1P08559 390 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 ZNF143P52747 638 aaPredicted RBP18.39■□□□□ 0.53
UBL3-201ENST00000380680 MMRN1Q13201 1228 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 FSCN1Q16658 493 aaKnown RBP18.39■□□□□ 0.53
UBL3-201ENST00000380680 IL31Q6EBC2 164 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 ZDHHC17Q8IUH5 632 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 TCP10LQ8TDR4 215 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 HAO1Q9UJM8 370 aa18.39■□□□□ 0.53
UBL3-201ENST00000380680 HNRNPCL1O60812 293 aaKnown RBP18.38■□□□□ 0.53
UBL3-201ENST00000380680 FBXO21O94952 628 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 NUDT17P0C025 328 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
UBL3-201ENST00000380680 FAM183BPQ6ZVS7 135 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 ELMO2Q96JJ3 720 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 THTPAQ9BU02 230 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 COQ4Q9Y3A0 265 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 CICQ96RK0 1608 aaPredicted RBP18.38■□□□□ 0.53
UBL3-201ENST00000380680 E5RI56 91 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 SNX2O60749 519 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 GPR142Q7Z601 462 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 C7orf43Q8WVR3 580 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 SGF29Q96ES7 293 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 ABCF3Q9NUQ8 709 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 ADA2Q9NZK5 511 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 DRG1Q9Y295 367 aaKnown RBP18.38■□□□□ 0.53
UBL3-201ENST00000380680 C2CD2Q9Y426 696 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 hCG_1818297A0A087WSY0 165 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 RPL22P35268 128 aaKnown RBP18.38■□□□□ 0.53
UBL3-201ENST00000380680 PLEKHA7Q6IQ23 1121 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 RGS9BPQ6ZS82 235 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.38■□□□□ 0.53
UBL3-201ENST00000380680 CELF6Q96J87 481 aaKnown RBP18.38■□□□□ 0.53
UBL3-201ENST00000380680 SNCAIPQ9Y6H5 919 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
UBL3-201ENST00000380680 B4GALT4O60513 344 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 RABGAP1LQ5R372 815 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 BBS12Q6ZW61 710 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 CCNJLQ8IV13 435 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 HTR3CQ8WXA8 447 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 AKR1A1P14550 325 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 AXLP30530 894 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 HIC1Q14526 733 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 CXCL17Q6UXB2 119 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 EP400NLQ6ZTU2 488 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 UPF3AQ9H1J1 476 aaKnown RBP18.37■□□□□ 0.53
UBL3-201ENST00000380680 LRRC40Q9H9A6 602 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 SUN2Q9UH99 717 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 MYL2P10916 166 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 GFAPP14136 432 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 FRA10AC1Q70Z53 315 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 TAS2R42Q7RTR8 314 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 SENP8Q96LD8 212 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
UBL3-201ENST00000380680 CPSF2Q9P2I0 782 aaKnown RBP18.37■□□□□ 0.53
UBL3-201ENST00000380680 ANXA9O76027 345 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 BGNP21810 368 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 ALLCQ8N6M5 410 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 CPXM1Q96SM3 734 aa18.37■□□□□ 0.53
UBL3-201ENST00000380680 APOBEC3GQ9HC16 384 aaKnown RBP18.37■□□□□ 0.53
UBL3-201ENST00000380680 AGPSO00116 658 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 OVOS1Q6IE37 1185 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 TTC27Q6P3X3 843 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 SHCBP1LQ9BZQ2 653 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 MYH7P12883 1935 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 AHDC1Q5TGY3 1603 aaPredicted RBP18.36■□□□□ 0.53
UBL3-201ENST00000380680 COL18A1P39060 1754 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 AP2B1P63010 937 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 WSCD1Q658N2 575 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 UNC93AQ86WB7 457 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 CPNE8Q86YQ8 564 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 NSL1Q96IY1 281 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 SNRNP25Q9BV90 132 aaKnown RBP18.36■□□□□ 0.53
UBL3-201ENST00000380680 GPR25O00155 361 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 SMIM10L2AP0DMW4 78 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 SMIM10L2BP0DMW5 78 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 LINC00523Q86TU6 105 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
UBL3-201ENST00000380680 NDE1Q9NXR1 346 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 PRDM4Q9UKN5 801 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
UBL3-201ENST00000380680 RECQLP46063 649 aaPredicted RBP18.35■□□□□ 0.53
UBL3-201ENST00000380680 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 EFHBQ8N7U6 833 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 ZC3H15Q8WU90 426 aaKnown RBP18.35■□□□□ 0.53
UBL3-201ENST00000380680 LRRN4Q8WUT4 740 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 ULBP1Q9BZM6 244 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 KDM4CQ9H3R0 1056 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 BAG5Q9UL15 447 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
UBL3-201ENST00000380680 ZBBXA8MT70 800 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 BANF1O75531 89 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 FAAP100Q0VG06 881 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 KBTBD12Q3ZCT8 623 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 MON1BQ7L1V2 547 aa18.35■□□□□ 0.53
UBL3-201ENST00000380680 PRPF39Q86UA1 669 aaKnown RBP18.35■□□□□ 0.53
UBL3-201ENST00000380680 MTDHQ86UE4 582 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms