RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 OLFM3Q96PB7 478 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 MMP19Q99542 508 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 LPIN3Q9BQK8 851 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 SMYD3Q9H7B4 428 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 TAS2R1Q9NYW7 299 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNRF3Q9ULT6 936 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 FOCADQ5VW36 1801 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 TMEM221A6NGB7 291 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 MCF2LO15068 1137 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 PGK2P07205 417 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 SUPT20HL2P0C7V6 817 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF24P17028 368 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 PHBP35232 272 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 CLCN3P51790 818 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 PPP2R5DQ14738 602 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 OASLQ15646 514 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 AMHR2Q16671 573 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 GJC2Q5T442 439 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 C16orf46Q6P387 395 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 ABHD15Q6UXT9 468 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF677Q86XU0 584 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 C12orf29Q8N999 325 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 CFAP61Q8NHU2 1237 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 KANSL3Q9P2N6 904 aa12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNFX1Q9P2E3 1918 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-202ENST00000380281 CXorf49A8MYA2 514 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 TYROBPO43914 113 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 PABPC4LP0CB38 370 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 ANPEPP15144 967 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 PGM1P36871 562 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 SH3D19Q5HYK7 790 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 RAPH1Q70E73 1250 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 PPIL6Q8IXY8 311 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 NME8Q8N427 588 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 POU5F2Q8N7G0 328 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 HSPBAP1Q96EW2 488 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 TTC25Q96NG3 672 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CGRRF1Q99675 332 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 SIKE1Q9BRV8 207 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 NMUR2Q9GZQ4 415 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 SMG5Q9UPR3 1016 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 AFG3L2Q9Y4W6 797 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 A0A0B4J269 797 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 TCRBV9S1A1TA0A576 114 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CCDC78A2IDD5 438 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 B2RBV5 119 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 TXNDC9O14530 226 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 TOM1L1O75674 476 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CALB1P05937 261 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 VARSP26640 1264 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 C7orf31Q8N865 590 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 GMLQ99445 158 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 DDX43Q9NXZ2 648 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 EURLQ9NYK6 297 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 HACL1Q9UJ83 578 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 COPEO14579 308 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 GRIA1P42261 906 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 ABCG1P45844 678 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CD151P48509 253 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 STAT5BP51692 787 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 TGFB2P61812 414 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 PEX6Q13608 980 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 KRT81Q14533 505 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 HADHQ16836 314 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 DUOXA2Q1HG44 320 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 SLC45A4Q5BKX6 768 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CIAPIN1Q6FI81 312 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 NIPA1Q7RTP0 329 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 ZNF554Q86TJ5 538 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 COPS5Q92905 334 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 THTPAQ9BU02 230 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 NIF3L1Q9GZT8 377 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 CYP4F11Q9HBI6 524 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 PPM1HQ9ULR3 514 aa12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-202ENST00000380281 ARHGAP42A6NI28 874 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ERBB2P04626 1255 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ITGB3P05106 788 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 KDELR1P24390 212 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 TBXAS1P24557 533 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 TCF7P36402 384 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 RBM44Q6ZP01 1051 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 LPAR1Q92633 364 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ADPGKQ9BRR6 497 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 PORCNQ9H237 461 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 PCDH9Q9HC56 1237 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 INIPQ9NRY2 104 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 CNTNAP2Q9UHC6 1331 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
PRPF40B-202ENST00000380281 ANKRD31Q8N7Z5 1873 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms