RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 TAF2Q6P1X5 1199 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 ANGPTL8Q6UXH0 198 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 TFAP2DQ7Z6R9 452 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 CHST12Q9NRB3 414 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 AJAP1Q9UKB5 411 aaPredicted RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 NDUFS3O75489 264 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 DGKIO75912 1065 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 CTXN3Q4LDR2 81 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 GPR20Q99678 358 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 FRMD8P1Q9BZ68 369 aaPredicted RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 NDE1Q9NXR1 346 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 KLRG2A4D1S0 409 aaPredicted RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 APOC4-APOC2K7ER74 178 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 LMNAP02545 664 aaKnown RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 APOC2P02655 101 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 NNMTP40261 264 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 MLH1P40692 756 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 C4orf22Q6V702 233 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 TMA16Q96EY4 203 aaKnown RBP13.64□□□□□ -0.23
NPHP4-203ENST00000378169 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 CAMKK2Q96RR4 588 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 ULBP1Q9BZM6 244 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 LMCD1Q9NZU5 365 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 MOSPD1Q9UJG1 213 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
NPHP4-203ENST00000378169 KDM3BQ7LBC6 1761 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 TCN1P20061 433 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 BGNP21810 368 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 BDNFP23560 247 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 SCNN1GP51170 649 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 TCP10LQ8TDR4 215 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 TBCBQ99426 244 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 LATS2Q9NRM7 1088 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ABCC6O95255 1503 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 GOLGA8TH3BQL2 631 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 DNAJC6O75061 913 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 BANF1O75531 89 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 CHKAP35790 457 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 HADHAP40939 763 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 HARS2P49590 506 aaKnown RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 POLE2P56282 527 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 PTK6Q13882 451 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 IMPG1Q17R60 797 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ANKRD20A4Q4UJ75 823 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ANKRD20A8PQ5CZ79 823 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ANKRD20A2Q5SQ80 823 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ANKRD20A1Q5TYW2 823 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 PRPF39Q86UA1 669 aaKnown RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 SH3TC2Q8TF17 1288 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 MTBPQ96DY7 904 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 PCYOX1Q9UHG3 505 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 AP3B1O00203 1094 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ADSSP30520 456 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 SCTRP47872 440 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 POU6F1Q14863 301 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 IFNEQ86WN2 208 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 MAGEB18Q96M61 343 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 IARS2Q9NSE4 1012 aaKnown RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 SLC24A2Q9UI40 661 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 MTO1Q9Y2Z2 717 aaKnown RBP13.63□□□□□ -0.23
NPHP4-203ENST00000378169 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 ANXA9O76027 345 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 AP2B1P63010 937 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 RAD51Q06609 339 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 FAM183BPQ6ZVS7 135 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 STRA8Q7Z7C7 330 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 HTR3CQ8WXA8 447 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 PGM2Q96G03 612 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 TRPV6Q9H1D0 765 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
NPHP4-203ENST00000378169 EEF1B2P24534 225 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 RPL10AP62906 217 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 TMEM259Q4ZIN3 620 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 AGGF1Q8N302 714 aaeCLIP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 ADAM2Q99965 735 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 MTG1Q9BT17 334 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 NXF3Q9H4D5 531 aaKnown RBP13.62□□□□□ -0.23
NPHP4-203ENST00000378169 GOLGA2P5Q9HBQ8 144 aa13.62□□□□□ -0.23
NPHP4-203ENST00000378169 RBM22Q9NW64 420 aaKnown RBP eCLIP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms