RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PPP1R10Q96QC0 940 aaKnown RBP16.81■□□□□ 0.28
RGP1-201ENST00000378078 KCTD14Q9BQ13 255 aaPredicted RBP16.81■□□□□ 0.28
RGP1-201ENST00000378078 SPG21Q9NZD8 308 aa16.81■□□□□ 0.28
RGP1-201ENST00000378078 ADRA2BP18089 450 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 DNAJC3Q13217 504 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 NAPEPLDQ6IQ20 393 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 CACTIN-AS1Q8N1I8 211 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 STX4Q12846 297 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 PPM1LQ5SGD2 360 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 IQCF2Q8IXL9 164 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 CMTM5Q96DZ9 223 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 CYLDQ9NQC7 956 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
RGP1-201ENST00000378078 ARL2BPQ9Y2Y0 163 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 TMEM120BA0PK00 339 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 TRIM49D1C9J1S8 452 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 THP07101 528 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 PLEKP08567 350 aaPredicted RBP16.8■□□□□ 0.28
RGP1-201ENST00000378078 AMD1P17707 334 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 MAGEA9P43362 315 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 ZNF57Q68EA5 555 aaPredicted RBP16.8■□□□□ 0.28
RGP1-201ENST00000378078 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 SERHL2Q9H4I8 314 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 SERHLQ9NQF3 203 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 FAM20BO75063 409 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 SNRPAP09012 282 aaKnown RBP16.8■□□□□ 0.28
RGP1-201ENST00000378078 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
RGP1-201ENST00000378078 NCF4Q15080 339 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 PDGFCQ9NRA1 345 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 NMRK1Q9NWW6 199 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 PTGISQ16647 500 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 DNAJC14Q6Y2X3 702 aaPredicted RBP16.8■□□□□ 0.28
RGP1-201ENST00000378078 SPPL2AQ8TCT8 520 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 NLNQ9BYT8 704 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 RFC5P40937 340 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 DEFA1P59665 94 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 DEFA3P59666 94 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 IL5RAQ01344 420 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 ANKRD13AQ8IZ07 590 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
RGP1-201ENST00000378078 THAP2Q9H0W7 228 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 RAB23Q9ULC3 237 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
RGP1-201ENST00000378078 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 KPNA3O00505 521 aaPredicted RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 XRCC4Q13426 336 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 PLA2G4EQ3MJ16 856 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 POMZP3Q6PJE2 187 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 CALR3Q96L12 384 aaKnown RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 GHRP10912 638 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 PDHBP11177 359 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 HNF4AP41235 474 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 SERPINB9P50453 376 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 AP5B1Q2VPB7 878 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 NARS2Q96I59 477 aaKnown RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 S100A13Q99584 98 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 TMEM8AQ9HCN3 771 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 CCT8P50990 548 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 AASDHQ4L235 1098 aaPredicted RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 PRR5LQ6MZQ0 368 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 SPATA31D3P0C874 917 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 GEMP55040 296 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 CYP24A1Q07973 514 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 RAPSNQ13702 412 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 ATP6AP1LQ52LC2 224 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 PPP1R26Q5T8A7 1209 aaPredicted RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 SPATA31D4Q6ZUB0 917 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 RNFT2Q96EX2 444 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 SESN1Q9Y6P5 492 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 A0A1B0GW55 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 CNPP09543 421 aaKnown RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4L2P0CJ85 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4L3P0CJ86 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4L4P0CJ87 422 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4L5P0CJ88 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4L6P0CJ89 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4L7P0CJ90 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 CCDC130P13994 396 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 OTUD4Q01804 1114 aaKnown RBP16.79■□□□□ 0.28
RGP1-201ENST00000378078 SCRN3Q0VDG4 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 CCDC185Q8N715 623 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 SLC4A5Q9BY07 1137 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 DUX4Q9UBX2 424 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 GRID1Q9ULK0 1009 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 AP4E1Q9UPM8 1137 aa16.79■□□□□ 0.28
RGP1-201ENST00000378078 ANXA9O76027 345 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 DENND6AQ8IWF6 608 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 CERS4Q9HA82 394 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 ADGRG1Q9Y653 693 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 PSMD11O00231 422 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 PDXKO00764 312 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 GLP2RO95838 553 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 KRT16P08779 473 aa16.78■□□□□ 0.28
RGP1-201ENST00000378078 KLHL17Q6TDP4 642 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms