RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SLC5A9Q2M3M2 681 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 BSPRYQ5W0U4 402 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 ZNF662Q6ZS27 426 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 GRASPQ7Z6J2 395 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-202ENST00000377342 SLC35G2Q8TBE7 412 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 ZNF564Q8TBZ8 553 aaPredicted RBP22.31■■□□□ 1.16
CBWD3-202ENST00000377342 PABPC5Q96DU9 382 aaKnown RBP22.31■■□□□ 1.16
CBWD3-202ENST00000377342 APOL5Q9BWW9 433 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 CTTNBP2NLQ9P2B4 639 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 C5orf42Q9H799 3197 aa22.31■■□□□ 1.16
CBWD3-202ENST00000377342 ZNF840PA6NDX5 716 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 RHOP08100 348 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 FOSL2P15408 326 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 PTPN2P17706 415 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 GABRR2P28476 465 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 KIF5AQ12840 1032 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 SNX30Q5VWJ9 437 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 ARCQ7LC44 396 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 REXO1L1PQ8IX06 675 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 PDZD8Q8NEN9 1154 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 KIAA1524Q8TCG1 905 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 EDEM1Q92611 657 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 POPDC2Q9HBU9 364 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 MRPL47Q9HD33 250 aaKnown RBP22.3■■□□□ 1.16
CBWD3-202ENST00000377342 TLR8Q9NR97 1041 aaKnown RBP22.3■■□□□ 1.16
CBWD3-202ENST00000377342 UVRAGQ9P2Y5 699 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 ZKSCAN5Q9Y2L8 839 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 SPTBN5Q9NRC6 3674 aaKnown RBP22.3■■□□□ 1.16
CBWD3-202ENST00000377342 TMEM191CA6NGB0 347 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 C2CD4BA6NLJ0 364 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 NCK2O43639 380 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 MOSPD3O75425 235 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 RNASE9P60153 205 aaKnown RBP22.3■■□□□ 1.16
CBWD3-202ENST00000377342 PRSS36Q5K4E3 855 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 OTUD1Q5VV17 481 aaPredicted RBP22.3■■□□□ 1.16
CBWD3-202ENST00000377342 SYPL2Q5VXT5 272 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 GPR149Q86SP6 731 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 RHOT2Q8IXI1 618 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 DEFB106AQ8N104 65 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 C17orf53Q8N3J3 647 aaPredicted RBP22.3■■□□□ 1.16
CBWD3-202ENST00000377342 TCEAL4Q96EI5 215 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 MSLNLQ96KJ4 702 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 ADAM33Q9BZ11 813 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 CLIC5Q9NZA1 410 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 NAALADL1Q9UQQ1 740 aa22.3■■□□□ 1.16
CBWD3-202ENST00000377342 MYL4P12829 197 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 HOXB8P17481 243 aaPredicted RBP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 HADHBP55084 474 aaKnown RBP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 PITX1P78337 314 aaPredicted RBP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 PABPC1LQ4VXU2 614 aaKnown RBP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 BEND5Q7L4P6 421 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 CCAR2Q8N163 923 aaKnown RBP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 ARHGAP18Q8N392 663 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 TXLNBQ8N3L3 684 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 SHKBP1Q8TBC3 707 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 BTBD6Q96KE9 485 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 S1PR5Q9H228 398 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 LZTFL1Q9NQ48 299 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 TRMT1Q9NXH9 659 aaKnown RBP22.29■■□□□ 1.16
CBWD3-202ENST00000377342 ANAPC7Q9UJX3 599 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 DOCK8Q8NF50 2099 aa22.29■■□□□ 1.16
CBWD3-202ENST00000377342 A0A1W2PRU2 124 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 GJA1P17302 382 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 PSEN1P49768 467 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 CYP4F8P98187 520 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 DCUN1D2Q6PH85 259 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 RXFP2Q8WXD0 754 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 CCSER2Q9H7U1 834 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 ABCC13Q9NSE7 274 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 TRPM5Q9NZQ8 1165 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 NUDT5Q9UKK9 219 aa22.28■■□□□ 1.16
CBWD3-202ENST00000377342 NUP210Q8TEM1 1887 aaPredicted RBP22.28■■□□□ 1.16
CBWD3-202ENST00000377342 MACROD2A1Z1Q3 448 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 RARGP13631 454 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 TFE3P19532 575 aaPredicted RBP22.27■■□□□ 1.16
CBWD3-202ENST00000377342 MATKP42679 507 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 CCDC85BQ15834 202 aaPredicted RBP22.27■■□□□ 1.16
CBWD3-202ENST00000377342 BTBD8Q5XKL5 378 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 PDZD4Q76G19 769 aaPredicted RBP22.27■■□□□ 1.16
CBWD3-202ENST00000377342 LEMD2Q8NC56 503 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 GOLGA1Q92805 767 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 CFAP57Q96MR6 1250 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 DDX23Q9BUQ8 820 aaKnown RBP22.27■■□□□ 1.16
CBWD3-202ENST00000377342 TSGA10Q9BZW7 698 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 PIDD1Q9HB75 910 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 KCND1Q9NSA2 647 aa22.27■■□□□ 1.16
CBWD3-202ENST00000377342 C2orf78A6NCI8 922 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 DPYSL4O14531 572 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 ZSCAN12O43309 604 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 BUB1O43683 1085 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 OAS1P00973 400 aaKnown RBP22.26■■□□□ 1.15
CBWD3-202ENST00000377342 NCAM1P13591 858 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 CDC25CP30307 473 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 PPP3CCP48454 512 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 DCAF6Q58WW2 860 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 STXBP5Q5T5C0 1151 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 EP400NLQ6ZTU2 488 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 FNIP1Q8TF40 1166 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 NT5C3BQ969T7 300 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms