RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 CCDC185Q8N715 623 aa22.58■■□□□ 1.2
RNF39-202ENST00000376751 ATP11CQ8NB49 1132 aa22.58■■□□□ 1.2
RNF39-202ENST00000376751 RTP4Q96DX8 246 aa22.58■■□□□ 1.2
RNF39-202ENST00000376751 KCTD15Q96SI1 283 aaPredicted RBP22.58■■□□□ 1.2
RNF39-202ENST00000376751 OSBPL7Q9BZF2 842 aa22.58■■□□□ 1.2
RNF39-202ENST00000376751 NRDE2Q9H7Z3 1164 aa22.58■■□□□ 1.2
RNF39-202ENST00000376751 ZNF638Q14966 1978 aaKnown RBP22.57■■□□□ 1.2
RNF39-202ENST00000376751 KCNN4O15554 427 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 DUSP11O75319 330 aaKnown RBP22.57■■□□□ 1.2
RNF39-202ENST00000376751 PIAS1O75925 651 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 RBL1P28749 1068 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 AFF1P51825 1210 aaKnown RBP22.57■■□□□ 1.2
RNF39-202ENST00000376751 DPYSL2Q16555 572 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 PAQR9Q6ZVX9 377 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 ARCQ7LC44 396 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 SAPCD2Q86UD0 394 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 PIGZQ86VD9 579 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 TNIP3Q96KP6 325 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 HSFY1Q96LI6 401 aa22.57■■□□□ 1.2
RNF39-202ENST00000376751 ELAC2Q9BQ52 826 aaKnown RBP22.57■■□□□ 1.2
RNF39-202ENST00000376751 DHX35Q9H5Z1 703 aaKnown RBP22.57■■□□□ 1.2
RNF39-202ENST00000376751 CYB561D2O14569 222 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 XPO1O14980 1071 aaKnown RBP22.56■■□□□ 1.2
RNF39-202ENST00000376751 SPAG7O75391 227 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 BEST1O76090 585 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 SLC10A3P09131 477 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 RDXP35241 583 aaKnown RBP22.56■■□□□ 1.2
RNF39-202ENST00000376751 ACADSBP45954 432 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 ADIGQ0VDE8 80 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 NBPF20Q3BBV1 942 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 KIAA0319Q5VV43 1072 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 GDF6Q6KF10 455 aaPredicted RBP22.56■■□□□ 1.2
RNF39-202ENST00000376751 CXCL17Q6UXB2 119 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 CCDC197Q8NCU1 140 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 GSTCDQ8NEC7 633 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 HNRNPABQ99729 332 aaKnown RBP22.56■■□□□ 1.2
RNF39-202ENST00000376751 SLC24A2Q9UI40 661 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 AP4E1Q9UPM8 1137 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 CHMP2BQ9UQN3 213 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 SMAPO00193 183 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 CTSHP09668 335 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 RARBP10826 455 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 DESP17661 470 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 GBE1Q04446 702 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 GNASQ5JWF2 1037 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 OTUD1Q5VV17 481 aaPredicted RBP22.56■■□□□ 1.2
RNF39-202ENST00000376751 PDIK1LQ8N165 341 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 AGGF1Q8N302 714 aaeCLIP22.56■■□□□ 1.2
RNF39-202ENST00000376751 FBF1Q8TES7 1133 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 PPM1EQ8WY54 764 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 NCAPGQ9BPX3 1015 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 TRABDQ9H4I3 376 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 ZFYVE28Q9HCC9 887 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 FGFR1OP2Q9NVK5 253 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.56■■□□□ 1.2
RNF39-202ENST00000376751 PSMC3IPQ9P2W1 217 aaPredicted RBP22.56■■□□□ 1.2
RNF39-202ENST00000376751 GTF2IRD1Q9UHL9 959 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 ST3GAL5Q9UNP4 418 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 TRPV2Q9Y5S1 764 aa22.56■■□□□ 1.2
RNF39-202ENST00000376751 BCLAF3A2AJT9 711 aaKnown RBP22.55■■□□□ 1.2
RNF39-202ENST00000376751 ZNF487B1APH4 448 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 PGK1P00558 417 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 CYBAP13498 195 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 MLH1P40692 756 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 WDR4P57081 412 aaKnown RBP22.55■■□□□ 1.2
RNF39-202ENST00000376751 PITX1P78337 314 aaPredicted RBP22.55■■□□□ 1.2
RNF39-202ENST00000376751 SLC10A2Q12908 348 aaPredicted RBP22.55■■□□□ 1.2
RNF39-202ENST00000376751 NR1H3Q13133 447 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 FAXCQ5TGI0 409 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 CCDC121Q6ZUS5 278 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 MICALL1Q8N3F8 863 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 MTG1Q9BT17 334 aaPredicted RBP22.55■■□□□ 1.2
RNF39-202ENST00000376751 DUSP16Q9BY84 665 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 ARHGAP39Q9C0H5 1083 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 ACSS3Q9H6R3 686 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 NKIRAS1Q9NYS0 192 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 MFHAS1Q9Y4C4 1052 aa22.55■■□□□ 1.2
RNF39-202ENST00000376751 ZBED1O96006 694 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 PTPN1P18031 435 aaKnown RBP22.54■■□□□ 1.2
RNF39-202ENST00000376751 GEMIN4P57678 1058 aaKnown RBP22.54■■□□□ 1.2
RNF39-202ENST00000376751 GJA9P57773 515 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 C3orf62Q6ZUJ4 267 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 DEFB106AQ8N104 65 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 PYROXD2Q8N2H3 581 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 LPPQ93052 612 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 DHRS4Q9BTZ2 278 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 RAB6BQ9NRW1 208 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 PAK5Q9P286 719 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 A0A1W2PPM1 405 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 FAM47DPA6NHR8 397 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 GABRDO14764 452 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 CHADO15335 359 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 FSBPO95073 299 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 CPP00450 1065 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 OAS1P00973 400 aaKnown RBP22.54■■□□□ 1.2
RNF39-202ENST00000376751 CHRNA1P02708 482 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 ELK3P41970 407 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 RASA2Q15283 850 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 MDH1BQ5I0G3 518 aa22.54■■□□□ 1.2
RNF39-202ENST00000376751 C4orf33Q8N1A6 199 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms