RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 THNSL1Q8IYQ7 743 aa14.68□□□□□ -0.06
CLCNKA-202ENST00000375692 PORCNQ9H237 461 aa14.68□□□□□ -0.06
CLCNKA-202ENST00000375692 RBPJLQ9UBG7 517 aa14.68□□□□□ -0.06
CLCNKA-202ENST00000375692 SLC7A8Q9UHI5 535 aa14.68□□□□□ -0.06
CLCNKA-202ENST00000375692 EFR3BQ9Y2G0 817 aa14.68□□□□□ -0.06
CLCNKA-202ENST00000375692 CENPFP49454 3210 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 I3L4J1 428 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 C1QAP02745 245 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 UBAP2LQ14157 1087 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 TAZQ16635 292 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 SLC26A11Q86WA9 606 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ULK2Q8IYT8 1036 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ARHGAP24Q8N264 748 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 E2F7Q96AV8 911 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 FAF2Q96CS3 445 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 CPXM1Q96SM3 734 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 NIF3L1Q9GZT8 377 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 SMYD2Q9NRG4 433 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 KCNK4Q9NYG8 393 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 NXF1Q9UBU9 619 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 PPM1HQ9ULR3 514 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 POLIQ9UNA4 740 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 PLA2G4CQ9UP65 541 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 PLLPQ9Y342 182 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 MEI4A8MW99 385 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 PRR5-ARHGAP8B1AHC4 643 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 MAGEC1O60732 1142 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 CNMDO75829 334 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ATG7O95352 703 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 APOC2P02655 101 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 LYNP07948 512 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 OAZ1P54368 228 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 IRX4P78413 519 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ARHGAP8P85298 464 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 TTC39BQ5VTQ0 682 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 C1orf228Q6PIY5 440 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ZCCHC23Q6ZST2 131 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 MS4A4AQ96JQ5 239 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 TRIM4Q9C037 500 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ZNF518BQ9C0D4 1074 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 RAB6BQ9NRW1 208 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 CPSF2Q9P2I0 782 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 TTLL3Q9Y4R7 772 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 KIAA1217Q5T5P2 1943 aa14.67□□□□□ -0.06
CLCNKA-202ENST00000375692 ARID2Q68CP9 1835 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 A0A1B0GVG6 124 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 PIGRP01833 764 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 NAMPTP43490 491 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 TFAMQ00059 246 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 ROR1Q01973 937 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 KCNJ11Q14654 390 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 RILPQ96NA2 401 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 TUBGCP5Q96RT8 1024 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 EBF4Q9BQW3 602 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 ACAD9Q9H845 621 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 PLAC1Q9HBJ0 212 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 ANGPTL2Q9UKU9 493 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 SPECC1L-ADORA2AF8WAN1 911 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 H7C0C1 242 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 PIK3R2O00459 728 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 KLF11O14901 512 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 RFPL1O75677 317 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 TM7SF2O76062 418 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 ERBB2P04626 1255 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 GSTA2P09210 222 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 CDH5P33151 784 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 ARL2P36404 184 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 ATP5OP48047 213 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 CDH8P55286 799 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 YWHAZP63104 245 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 SNAPC2Q13487 334 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 C1orf146Q5VVC0 180 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 NET1Q7Z628 596 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 MYLK4Q86YV6 388 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 NUDCD3Q8IVD9 361 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 C2orf69Q8N8R5 385 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 GBP5Q96PP8 586 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 PEBP4Q96S96 227 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 SPATC1LQ9H0A9 340 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 TAGLN3Q9UI15 199 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 PCDHGC3Q9UN70 934 aa14.66□□□□□ -0.06
CLCNKA-202ENST00000375692 LGR5O75473 907 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 SNRPAP09012 282 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 SUPT20HL2P0C7V6 817 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 TSHRP16473 764 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 OSTNP61366 133 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 TRPC3Q13507 836 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 LRRC36Q1X8D7 754 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 FAM91A1Q658Y4 838 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 BRSK2Q8IWQ3 736 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 CMASQ8NFW8 434 aaPredicted RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 C7orf26Q96N11 449 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 FRMD8P1Q9BZ68 369 aaPredicted RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 ETAA1Q9NY74 926 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 ZC3H7BQ9UGR2 993 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 USP18Q9UMW8 372 aa14.65□□□□□ -0.06
CLCNKA-202ENST00000375692 F8W8V4 182 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms