RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 GSTCDQ8NEC7 633 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 FAM172AQ8WUF8 416 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 EBF4Q9BQW3 602 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 FRMD8Q9BZ67 464 aaPredicted RBP21.95■■□□□ 1.1
UPF3A-202ENST00000375299 ZC3H7BQ9UGR2 993 aaKnown RBP21.95■■□□□ 1.1
UPF3A-202ENST00000375299 SORCS3Q9UPU3 1222 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 TRDMT1O14717 391 aaKnown RBP21.95■■□□□ 1.1
UPF3A-202ENST00000375299 TNFSF9P41273 254 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 EFHC1Q5JVL4 640 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 DHDDSQ86SQ9 333 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 EPAS1Q99814 870 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 SMYD2Q9NRG4 433 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 RAB6BQ9NRW1 208 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 TRUB2O95900 331 aaKnown RBP21.94■■□□□ 1.1
UPF3A-202ENST00000375299 ARHGAP22Q7Z5H3 698 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 DTNBP1Q96EV8 351 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 PAK5Q9P286 719 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 SCAF8Q9UPN6 1271 aaKnown RBP21.94■■□□□ 1.1
UPF3A-202ENST00000375299 BIRC5O15392 142 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 KRT38O76015 456 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 RGS20O76081 388 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 C6orf222P0C671 652 aaPredicted RBP21.94■■□□□ 1.1
UPF3A-202ENST00000375299 OSBPP22059 807 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 PDE1BQ01064 536 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 MMRN1Q13201 1228 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 STX3Q13277 289 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 CFAP157Q5JU67 520 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 RASSF3Q86WH2 238 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 ZBED3Q96IU2 234 aaPredicted RBP21.94■■□□□ 1.1
UPF3A-202ENST00000375299 LHX5Q9H2C1 402 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 PLAC1Q9HBJ0 212 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 USP18Q9UMW8 372 aa21.94■■□□□ 1.1
UPF3A-202ENST00000375299 H7C0C1 242 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 UGT1A9O60656 530 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 ARL2P36404 184 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 ATP5OP48047 213 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 GRM1Q13255 1194 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 XYLT1Q86Y38 959 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 TTLL6Q8N841 843 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 SHKBP1Q8TBC3 707 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 UGT1A7Q9HAW7 530 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 UGT1A10Q9HAW8 530 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 UGT1A8Q9HAW9 530 aa21.93■■□□□ 1.1
UPF3A-202ENST00000375299 WNT10BO00744 389 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 CD19P15391 556 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 CRHR1P34998 444 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 ARCQ7LC44 396 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 DRAXINQ8NBI3 349 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-202ENST00000375299 AGBL3Q8NEM8 1001 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 HAPLN3Q96S86 360 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 DHX33Q9H6R0 707 aaKnown RBP21.92■■□□□ 1.1
UPF3A-202ENST00000375299 XAB2Q9HCS7 855 aaKnown RBP21.92■■□□□ 1.1
UPF3A-202ENST00000375299 THAP1Q9NVV9 213 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 COMMD3-BMI1R4GMX3 469 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 ARHGAP42A6NI28 874 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 APOEP02649 317 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 SUPT20HL2P0C7V6 817 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 CSH1P0DML2 217 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 CSH2P0DML3 217 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 ASPAP45381 313 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 SLC25A3Q00325 362 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 TRPC3Q13507 836 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 SUPT20HL1Q3ZLR7 823 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 FAM182AQ5T1J6 154 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 ZCCHC23Q6ZST2 131 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 NDUFAF2Q8N183 169 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 STKLD1Q8NE28 680 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 PYDC1Q8WXC3 89 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 EZH1Q92800 747 aaPredicted RBP21.92■■□□□ 1.1
UPF3A-202ENST00000375299 CPXM1Q96SM3 734 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 SIKE1Q9BRV8 207 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 TMEM134Q9H6X4 195 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 RNF146Q9NTX7 359 aa21.92■■□□□ 1.1
UPF3A-202ENST00000375299 ERBB2P04626 1255 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 PIM1P11309 404 aaPredicted RBP21.91■■□□□ 1.1
UPF3A-202ENST00000375299 ASPHQ12797 758 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 MED21Q13503 144 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 SFT2D3Q587I9 215 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 PEBP4Q96S96 227 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 SDCBP2Q9H190 292 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 MED7O43513 233 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 CCNT2O60583 730 aaKnown RBP21.91■■□□□ 1.1
UPF3A-202ENST00000375299 ENDOD1O94919 500 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 CDH6P55285 790 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 TUBB3Q13509 450 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 ACAP1Q15027 740 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 ZNF699Q32M78 642 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 FAM47CQ5HY64 1035 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 CAND1Q86VP6 1230 aaKnown RBP21.91■■□□□ 1.1
UPF3A-202ENST00000375299 B4GALNT2Q8NHY0 566 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 NDNQ99608 321 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 USP29Q9HBJ7 922 aa21.91■■□□□ 1.1
UPF3A-202ENST00000375299 UQCRBP14927 111 aa21.9■■□□□ 1.1
UPF3A-202ENST00000375299 TFDP2Q14188 446 aa21.9■■□□□ 1.1
UPF3A-202ENST00000375299 DUOXA2Q1HG44 320 aa21.9■■□□□ 1.1
UPF3A-202ENST00000375299 FAXCQ5TGI0 409 aa21.9■■□□□ 1.1
UPF3A-202ENST00000375299 RNF111Q6ZNA4 994 aa21.9■■□□□ 1.1
UPF3A-202ENST00000375299 WDR75Q8IWA0 830 aaKnown RBP21.9■■□□□ 1.1
UPF3A-202ENST00000375299 RIPK3Q9Y572 518 aa21.9■■□□□ 1.1
UPF3A-202ENST00000375299 KCNN4O15554 427 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms