RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FAM111AQ96PZ2 611 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 FIS1Q9Y3D6 152 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 STYXL1Q9Y6J8 313 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 FAM189A1O60320 539 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 B4GALT4O60513 344 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 IL18RAPO95256 599 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
CXCL12-203ENST00000374429 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-203ENST00000374429 RANBP1P43487 201 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 ARL4CP56559 192 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 RCN2Q14257 317 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 KBTBD12Q3ZCT8 623 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 MAP7D3Q8IWC1 876 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 MORC4Q8TE76 937 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 MAML1Q92585 1016 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 MS4A4AQ96JQ5 239 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 STMN4Q9H169 189 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-203ENST00000374429 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 LTBP3Q9NS15 1303 aa11.24□□□□□ -0.61
CXCL12-203ENST00000374429 DNAJC25-GNG10A0A024R161 153 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 VDRP11473 427 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 BDNFP23560 247 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CD52P31358 61 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SNX17Q15036 470 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SYPL2Q5VXT5 272 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 DCLK2Q8N568 766 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 TBCBQ99426 244 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 KRT82Q9NSB4 513 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 DDX43Q9NXZ2 648 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 TTC3P53804 2025 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 C2CD2LO14523 706 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 DNALI1O14645 258 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 APOL1O14791 398 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 TPD52L2O43399 206 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SOAT2O75908 522 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 MCF2P10911 925 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 IVDP26440 423 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CDC25CP30307 473 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CLCNKBP51801 687 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 GHRHRQ02643 423 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 MOGSQ13724 837 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CNGA2Q16280 664 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 ZNF792Q3KQV3 632 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 C16orf46Q6P387 395 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 PRCCQ92733 491 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 KDM4CQ9H3R0 1056 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 RMI1Q9H9A7 625 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 DDIT4Q9NX09 232 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SLC17A7Q9P2U7 560 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 TSR3Q9UJK0 312 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 MYBPHLA2RUH7 354 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CDH16O75309 829 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 UBOX5O94941 541 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 TRUB2O95900 331 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 AGTP01019 485 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CYP2F1P24903 491 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 ABCD1P33897 745 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 ARL4AP40617 200 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 PSEN2P49810 448 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 SKOR1P84550 965 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 MTA1Q13330 715 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 PTK6Q13882 451 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 CCDC14Q49A88 953 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 PCMTD2Q9NV79 361 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 WHRNQ9P202 907 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 AP4E1Q9UPM8 1137 aa11.23□□□□□ -0.61
CXCL12-203ENST00000374429 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
CXCL12-203ENST00000374429 C17orf102A2RUQ5 167 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 DFFAO00273 331 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ABLIM1O14639 778 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 PYGBP11216 843 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CXCR3P49682 368 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 TKTL1P51854 596 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 HEATR6Q6AI08 1181 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 PRPF39Q86UA1 669 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 MPP5Q8N3R9 675 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 MICAL1Q8TDZ2 1067 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 CPT1BQ92523 772 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 PAFAH2Q99487 392 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ADAM7Q9H2U9 754 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 PTPRHQ9HD43 1115 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 KLHL8Q9P2G9 620 aaPredicted RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 TXNDC16Q9P2K2 825 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 IPPQ9Y573 584 aa11.22□□□□□ -0.61
CXCL12-203ENST00000374429 TARSP26639 723 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 TKTP29401 623 aaKnown RBP11.22□□□□□ -0.61
CXCL12-203ENST00000374429 AP3M2P53677 418 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms