RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CDR2Q01850 454 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 USP4Q13107 963 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 SIX5Q8N196 739 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
HDHD3-202ENST00000374180 CLEC4CQ8WTT0 213 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 RNF139Q8WU17 664 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 BAP1Q92560 729 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 GOLGA1Q92805 767 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 DNASE1L2Q92874 299 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 CPXM1Q96SM3 734 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 EDEM3Q9BZQ6 932 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 SYNCQ9H7C4 482 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 ABCC13Q9NSE7 274 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 CFAP97Q9P2B7 532 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
HDHD3-202ENST00000374180 FAM86C2PA6NEL3 165 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
HDHD3-202ENST00000374180 GPR37L1O60883 481 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 LSM8O95777 96 aaKnown RBP16.74■□□□□ 0.27
HDHD3-202ENST00000374180 FERP16591 822 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 EFEMP1Q12805 493 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 FIGNQ5HY92 759 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 CSGALNACT1Q8TDX6 532 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 SLC20A1Q8WUM9 679 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 EDEM1Q92611 657 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 ZFRQ96KR1 1074 aaKnown RBP16.74■□□□□ 0.27
HDHD3-202ENST00000374180 FAM83CQ9BQN1 747 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 KLF16Q9BXK1 252 aaPredicted RBP16.74■□□□□ 0.27
HDHD3-202ENST00000374180 MFSD1Q9H3U5 465 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 ARHGEF3Q9NR81 526 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 HEBP1Q9NRV9 189 aa16.74■□□□□ 0.27
HDHD3-202ENST00000374180 OLA1Q9NTK5 396 aaKnown RBP16.74■□□□□ 0.27
HDHD3-202ENST00000374180 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
HDHD3-202ENST00000374180 KRBA1A5PL33 1030 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 ARNTLO00327 626 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 MDM4O15151 490 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 PAPSS1O43252 624 aaPredicted RBP16.73■□□□□ 0.27
HDHD3-202ENST00000374180 LTFP02788 710 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 CDH5P33151 784 aaPredicted RBP16.73■□□□□ 0.27
HDHD3-202ENST00000374180 IFNAR2P48551 515 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 TNK2Q07912 1038 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 PDGFRLQ15198 375 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 TMEM31Q5JXX7 168 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 IER5LQ5T953 404 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 MIB1Q86YT6 1006 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 KIAA1958Q8N8K9 716 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 IPO4Q8TEX9 1081 aaKnown RBP16.73■□□□□ 0.27
HDHD3-202ENST00000374180 OSCP1Q8WVF1 389 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 PBXIP1Q96AQ6 731 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 FAM149B1Q96BN6 582 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 SHDQ96IW2 340 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 C11orf16Q9NQ32 467 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 STRIP2Q9ULQ0 834 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 SH3BP1Q9Y3L3 701 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 WNT6Q9Y6F9 365 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 MYO16Q9Y6X6 1858 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 E2F8A0AVK6 867 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 LRRC53A6NM62 1247 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 STK25O00506 426 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 IRF1P10914 325 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 CHRNB2P17787 502 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 COG7P83436 770 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 FMO1Q01740 532 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 PRKCQQ04759 706 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 MLF2Q15773 248 aaPredicted RBP16.73■□□□□ 0.27
HDHD3-202ENST00000374180 TRIM68Q6AZZ1 485 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 IRF2BP2Q7Z5L9 587 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 BMP8AQ7Z5Y6 402 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 ERICH1Q86X53 443 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
HDHD3-202ENST00000374180 CPA5Q8WXQ8 436 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 LINC00597Q9H2U6 94 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 EBF3Q9H4W6 596 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 GTSE1Q9NYZ3 720 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 MARCH2Q9P0N8 246 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 TJP2Q9UDY2 1190 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 RASAL2Q9UJF2 1139 aa16.73■□□□□ 0.27
HDHD3-202ENST00000374180 F5P12259 2224 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 A0A1W2PQJ5 194 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 SLC9A3R1O14745 358 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-202ENST00000374180 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
HDHD3-202ENST00000374180 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-202ENST00000374180 KPNA1P52294 538 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-202ENST00000374180 RUNX3Q13761 415 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 ASIC2Q16515 512 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 PTPN20Q4JDL3 420 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 SFMBT2Q5VUG0 894 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 TRIM72Q6ZMU5 477 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 MSANTD4Q8NCY6 345 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 TTC8Q8TAM2 541 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 CPLX3Q8WVH0 158 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 ATP2A3Q93084 1043 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 AGPAT1Q99943 283 aa16.72■□□□□ 0.27
HDHD3-202ENST00000374180 TRIM62Q9BVG3 475 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms