RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 APOL1O14791 398 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 DAB1O75553 588 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 TGM2P21980 687 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 DARS2Q6PI48 645 aaKnown RBP20.41■□□□□ 0.86
HDAC1-201ENST00000373548 PCGF5Q86SE9 256 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 FAM35AQ86V20 835 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 CCDC185Q8N715 623 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 PCED1BQ96HM7 432 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 CFHR5Q9BXR6 569 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 MAGEB5Q9BZ81 275 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 I3L4J1 428 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 IVLP07476 585 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 NRLP54845 237 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 ANKRD22Q5VYY1 191 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 PPIL6Q8IXY8 311 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 PGBD4Q96DM1 585 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 SERPINB12Q96P63 405 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 SMOQ99835 787 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 RABEP2Q9H5N1 569 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 DHX35Q9H5Z1 703 aaKnown RBP20.4■□□□□ 0.86
HDAC1-201ENST00000373548 MTMR10Q9NXD2 777 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 CDH9Q9ULB4 789 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 AP4E1Q9UPM8 1137 aa20.4■□□□□ 0.86
HDAC1-201ENST00000373548 TCEA3O75764 348 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 CYP2F1P24903 491 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 RABGGTBP53611 331 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 BCAR1P56945 870 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 YWHAZP63104 245 aaKnown RBP20.39■□□□□ 0.86
HDAC1-201ENST00000373548 GRIK3Q13003 919 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 FASTKD3Q14CZ7 662 aaKnown RBP20.39■□□□□ 0.86
HDAC1-201ENST00000373548 SLC25A52Q3SY17 297 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 PAN2Q504Q3 1202 aaKnown RBP20.39■□□□□ 0.86
HDAC1-201ENST00000373548 OTUD1Q5VV17 481 aaPredicted RBP20.39■□□□□ 0.86
HDAC1-201ENST00000373548 CD300LGQ6UXG3 332 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 NAT8LQ8N9F0 302 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 RAET1EQ8TD07 263 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 RTP3Q9BQQ7 232 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 TMEM30AQ9NV96 361 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 INPP5FQ9Y2H2 1132 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 SQORQ9Y6N5 450 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 FRMPD3Q5JV73 1810 aa20.39■□□□□ 0.86
HDAC1-201ENST00000373548 H7C0C1 242 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 AP1G2O75843 785 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 B3GAT3O94766 335 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 STIP1P31948 543 aaKnown RBP20.39■□□□□ 0.85
HDAC1-201ENST00000373548 ATP5OP48047 213 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 SULT1E1P49888 294 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 TKTL1P51854 596 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 CACNA2D1P54289 1103 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 PITX1P78337 314 aaPredicted RBP20.39■□□□□ 0.85
HDAC1-201ENST00000373548 GAD2Q05329 585 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 DCAF6Q58WW2 860 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 ZNF598Q86UK7 904 aaKnown RBP20.39■□□□□ 0.85
HDAC1-201ENST00000373548 ECHDC2Q86YB7 292 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 SIX6OS1Q8N1H7 587 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 TAB3Q8N5C8 712 aaPredicted RBP20.39■□□□□ 0.85
HDAC1-201ENST00000373548 ZMIZ2Q8NF64 920 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 MYCBPAPQ8TBZ2 947 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 BCAS4Q8TDM0 211 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 KCTD15Q96SI1 283 aaPredicted RBP20.39■□□□□ 0.85
HDAC1-201ENST00000373548 STMN4Q9H169 189 aaPredicted RBP20.39■□□□□ 0.85
HDAC1-201ENST00000373548 NRDE2Q9H7Z3 1164 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 HEY1Q9Y5J3 304 aa20.39■□□□□ 0.85
HDAC1-201ENST00000373548 GOLGA8MH3BSY2 632 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 ABHD2P08910 425 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 CKBP12277 381 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 MMP13P45452 471 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 BRCC3P46736 316 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 TUSC3Q13454 348 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 NT5C3BQ969T7 300 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 GLT1D1Q96MS3 346 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 TRPV6Q9H1D0 765 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 CNOT10Q9H9A5 744 aaKnown RBP20.38■□□□□ 0.85
HDAC1-201ENST00000373548 USP29Q9HBJ7 922 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 ALOX15BO15296 676 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 TOMM70O94826 608 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 ODC1P11926 461 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 SKIP12755 728 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 PCSK1P29120 753 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 NOS2P35228 1153 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 HP1BP3Q5SSJ5 553 aaPredicted RBP20.38■□□□□ 0.85
HDAC1-201ENST00000373548 TRAF7Q6Q0C0 670 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 HFE2Q6ZVN8 426 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 CENPUQ71F23 418 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 GPRIN1Q7Z2K8 1008 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 BNIPLQ7Z465 357 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 FAM131BQ86XD5 332 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 PXYLP1Q8TE99 480 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 SLC2A13Q96QE2 648 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 KCNK16Q96T55 309 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 NPY6RQ99463 290 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 UBN1Q9NPG3 1134 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 CTNNAL1Q9UBT7 734 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 PTCH2Q9Y6C5 1203 aa20.38■□□□□ 0.85
HDAC1-201ENST00000373548 MOXD2PA6NHM9 499 aa20.37■□□□□ 0.85
HDAC1-201ENST00000373548 NRP1O14786 923 aa20.37■□□□□ 0.85
HDAC1-201ENST00000373548 MDM1Q8TC05 714 aa20.37■□□□□ 0.85
HDAC1-201ENST00000373548 TTC25Q96NG3 672 aa20.37■□□□□ 0.85
HDAC1-201ENST00000373548 ULBP1Q9BZM6 244 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms