RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 PRPF39Q86UA1 669 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 CTAGE3PQ8IX95 158 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 CPXM1Q96SM3 734 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 TAS2R1Q9NYW7 299 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 ZNF214Q9UL59 606 aaPredicted RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MAFBQ9Y5Q3 323 aaPredicted RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MYH9P35579 1960 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MCF2LO15068 1137 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 ADCY3O60266 1144 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 CDK7P50613 346 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 PRKD1Q15139 912 aaPredicted RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 LRRC36Q1X8D7 754 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 CDHR3Q6ZTQ4 885 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 C17orf50Q8WW18 174 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 SKA1Q96BD8 255 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 CFAP36Q96G28 342 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 APOPT1Q96IL0 206 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 ZBED3Q96IU2 234 aaPredicted RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 HNRNPCL1O60812 293 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 PSMG1O95456 288 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 BAG2O95816 211 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MIPP30301 263 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 HMGCS2P54868 508 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 DARS2Q6PI48 645 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 ZNF554Q86TJ5 538 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 ALYREFQ86V81 257 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 THNSL1Q8IYQ7 743 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 REPS2Q8NFH8 660 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MECRQ9BV79 373 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MIS12Q9H081 205 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 STRIP2Q9ULQ0 834 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 PCDHGC3Q9UN70 934 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 EFR3BQ9Y2G0 817 aa16.45■□□□□ 0.22
PABPC4-201ENST00000372856 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
PABPC4-201ENST00000372856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 FCHO1O14526 889 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 KRT19P08727 400 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 POLR2BP30876 1174 aaKnown RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 CDH5P33151 784 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 CCDC92Q53HC0 331 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 MDH1BQ5I0G3 518 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 CCDC62Q6P9F0 684 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 SLC44A1Q8WWI5 657 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 NMUR2Q9GZQ4 415 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 RPL26L1Q9UNX3 145 aaKnown RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 PIK3R2O00459 728 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 FAM189A1O60320 539 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 ATG7O95352 703 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 DHRS4L1P0CG22 281 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 MLH1P40692 756 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 ASPAP45381 313 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 BACE1P56817 501 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 AP1B1Q10567 949 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 THOC5Q13769 683 aaKnown RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 BTG3Q14201 252 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 RAB6CQ53S08 254 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 FAXCQ5TGI0 409 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 RTKN2Q8IZC4 609 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 ST13P4Q8IZP2 240 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 PPM1NQ8N819 430 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 PDCD7Q8N8D1 485 aaKnown RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 LRRN4Q8WUT4 740 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 RAB6CQ9H0N0 254 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 ZNF395Q9H8N7 513 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-201ENST00000372856 PCDH18Q9HCL0 1135 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 PFDN4Q9NQP4 134 aa16.44■□□□□ 0.22
PABPC4-201ENST00000372856 APOC4-APOC2K7ER74 178 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 RNASEH1O60930 286 aaKnown RBP16.43■□□□□ 0.22
PABPC4-201ENST00000372856 TOM1L1O75674 476 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 MAP3K6O95382 1288 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 PGM3O95394 542 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 APOC2P02655 101 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 ERBB2P04626 1255 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 YWHAEP62258 255 aaKnown RBP16.43■□□□□ 0.22
PABPC4-201ENST00000372856 R3HDM1Q15032 1099 aaKnown RBP16.43■□□□□ 0.22
PABPC4-201ENST00000372856 DPH6Q7L8W6 267 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 OXNAD1Q96HP4 312 aaPredicted RBP16.43■□□□□ 0.22
PABPC4-201ENST00000372856 TMEM134Q9H6X4 195 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 ARID2Q68CP9 1835 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 TRIM49D1C9J1S8 452 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 C1orf228Q6PIY5 440 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 FAF2Q96CS3 445 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 SRPK1Q96SB4 655 aaKnown RBP16.43■□□□□ 0.22
PABPC4-201ENST00000372856 TTC1Q99614 292 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 XYLT2Q9H1B5 865 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 WDR37Q9Y2I8 494 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 KIAA1217Q5T5P2 1943 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 CCDC195A0A1B0GUA6 201 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 COPEO14579 308 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 MSCO60682 206 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 PEX10O60683 326 aa16.43■□□□□ 0.22
PABPC4-201ENST00000372856 VARSP26640 1264 aaKnown RBP16.43■□□□□ 0.22
PABPC4-201ENST00000372856 CA8P35219 290 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms