RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PHKA2P46019 1235 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 OCLNQ16625 522 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 FAM71DQ8N9W8 422 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 EXD1Q8NHP7 514 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 DPF2Q92785 391 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 A0A0B4J269 797 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 A0A1W2PQ72 361 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 BCLAF3A2AJT9 711 aaKnown RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 PRLRP16471 622 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 TUBB3Q13509 450 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 MTMR1Q13613 665 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 MINDY2Q8NBR6 621 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 PPP1R10Q96QC0 940 aaKnown RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 DSN1Q9H410 356 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 S100A2P29034 98 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 RPS6KA3P51812 740 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 CDC16Q13042 620 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 FIG4Q92562 907 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 RNF145Q96MT1 663 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 THAP1Q9NVV9 213 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 ATP2C1P98194 919 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 PCSK7Q16549 785 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 RIPOR1Q6ZS17 1223 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 ZNF669Q96BR6 464 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 ZHX1-C8orf76Q96EF9 292 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 STARD13Q9Y3M8 1113 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 POU5F1Q01860 360 aaKnown RBP15.71■□□□□ 0.1
COL5A1-201ENST00000371817 ADHFE1Q8IWW8 467 aa15.71■□□□□ 0.1
COL5A1-201ENST00000371817 DDX50Q9BQ39 737 aaKnown RBP15.71■□□□□ 0.1
COL5A1-201ENST00000371817 WWOXQ9NZC7 414 aa15.71■□□□□ 0.1
COL5A1-201ENST00000371817 ALG6Q9Y672 507 aa15.71■□□□□ 0.1
COL5A1-201ENST00000371817 REREQ9P2R6 1566 aa15.71■□□□□ 0.1
COL5A1-201ENST00000371817 FAM196BA6NMK8 535 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 LOC110117498-PIK3R3F6TDL0 507 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 H3BMM5 538 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 MATN2O00339 956 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 YWHAZP63104 245 aaKnown RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TFB1MQ8WVM0 346 aaKnown RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SIPA1Q96FS4 1042 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 COPS7BQ9H9Q2 264 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 CIDEBQ9UHD4 219 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 RALAP11233 206 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 DGKDQ16760 1214 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TMEM110Q86TL2 294 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SLC44A2Q8IWA5 706 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 FAM20AQ96MK3 541 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SLC16A4O15374 487 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 ETS2P15036 469 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TNFAIP8L3Q5GJ75 292 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 WDR37Q9Y2I8 494 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SCNN1DP51172 638 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 NAT9Q9BTE0 207 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 FRMD8P1Q9BZ68 369 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SLC24A2Q9UI40 661 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 RPS6KL1Q9Y6S9 549 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 CHP2O43745 196 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SKIV2L2P42285 1042 aaKnown RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 GCLCP48506 637 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 FMO5P49326 533 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SULT1E1P49888 294 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TTC29Q8NA56 475 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 VTI1BQ9UEU0 232 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SLC30A1Q9Y6M5 507 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 ATXN2Q99700 1313 aaKnown RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 PDXKO00764 312 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TRAPPC3O43617 180 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 ATP6V1G1O75348 118 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 FASTKD5Q7L8L6 764 aaKnown RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 HPS3Q969F9 1004 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 RAPGEFL1Q9UHV5 662 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 RPAP1Q9BWH6 1393 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TFECO14948 347 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SCGNO76038 276 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 FDFT1P37268 417 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 AVPR1AP37288 418 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 PTGER2P43116 358 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 HIST2H2ACQ16777 129 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 HIST2H2AA3Q6FI13 130 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 ZNF467Q7Z7K2 595 aaPredicted RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 SLC22A9Q8IVM8 553 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 ELMOD1Q8N336 334 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 TPD52L3Q96J77 140 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 PPP1R16BQ96T49 567 aa15.7■□□□□ 0.1
COL5A1-201ENST00000371817 CDC42EP4Q9H3Q1 356 aaKnown RBP15.7■□□□□ 0.1
COL5A1-201ENST00000371817 ADI1Q9BV57 179 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 RIBC2Q9H4K1 309 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 GPRC5DQ9NZD1 345 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 MDM4O15151 490 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 PPP2R1BP30154 601 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 ALDH1A3P47895 512 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 RALGDSQ12967 914 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 SLC13A5Q86YT5 568 aaPredicted RBP15.69■□□□□ 0.1
COL5A1-201ENST00000371817 MED15Q96RN5 788 aa15.69■□□□□ 0.1
COL5A1-201ENST00000371817 CCDC154A6NI56 674 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms