RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ALADP13716 330 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 RFC1P35251 1148 aaPredicted RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 GABRB2P47870 512 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 CACNA2D1P54289 1103 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 MGAT5Q09328 741 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 DNAJC3Q13217 504 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SIX1Q15475 284 aaPredicted RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 GOLGA7BQ2TAP0 167 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 EXOC3L1Q86VI1 746 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ZDHHC14Q8IZN3 488 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 FNIP1Q8TF40 1166 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SNX25Q9H3E2 840 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 GALNT8Q9NY28 637 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 DDX56Q9NY93 547 aaKnown RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SRRDQ9UH36 339 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ASIC3Q9UHC3 531 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ARL2BPQ9Y2Y0 163 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 PEX11AO75192 247 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SPAG7O75391 227 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ATP6V1C1P21283 382 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 CST5P28325 142 aaPredicted RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 DRG2P55039 364 aaKnown RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 HADHQ16836 314 aaKnown RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SOWAHAQ2M3V2 549 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 DUPD1Q68J44 220 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 C12orf29Q8N999 325 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 APPL2Q8NEU8 664 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 STK32AQ8WU08 396 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 NDNQ99608 321 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 PITPNM3Q9BZ71 974 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 OSBPL8Q9BZF1 889 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SENP6Q9GZR1 1112 aaPredicted RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 NVLO15381 856 aaKnown RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 HUS1O60921 280 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 CHRNA1P02708 482 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 KRT1P04264 644 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 RALAP11233 206 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 GNL1P36915 607 aaPredicted RBP10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 THPOP40225 353 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 PTGIRP43119 386 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 PLCB3Q01970 1234 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 OGDHQ02218 1023 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ZNF252P-AS1Q0IIN9 211 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 RFWD3Q6PCD5 774 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 RNF180Q86T96 592 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 ECHDC2Q86YB7 292 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 TEX9Q8N6V9 391 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 LRRC8CQ8TDW0 803 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 C1orf54Q8WWF1 131 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 MCRS1Q96EZ8 462 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 PWWP2AQ96N64 755 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 HEMGNQ9BXL5 484 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SLCO1B3Q9NPD5 702 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 FAM105AQ9NUU6 356 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 SLC38A7Q9NVC3 462 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 NMRK1Q9NWW6 199 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 TJP2Q9UDY2 1190 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 NOD1Q9Y239 953 aa10.4□□□□□ -0.74
PRPF38B-203ENST00000370025 PCNTO95613 3336 aa10.4□□□□□ -0.75
PRPF38B-203ENST00000370025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 SETSIPP0DME0 302 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 BRAFP15056 766 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 EIF3BP55884 814 aaKnown RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 SETDB1Q15047 1291 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 LRRC36Q1X8D7 754 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 FAM102AQ5T9C2 384 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 OR6B2Q6IFH4 312 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 TTC27Q6P3X3 843 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 GRK7Q8WTQ7 553 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 RAB3IPQ96QF0 476 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 CYTH2Q99418 400 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 MMADHCQ9H3L0 296 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 TRPA1O75762 1119 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 CABYRO75952 493 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 RCN1Q15293 331 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 TAOK1Q7L7X3 1001 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 GSTA5Q7RTV2 222 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 JOSD2Q8TAC2 188 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 RAET1EQ8TD07 263 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 WNT8BQ93098 351 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 TBC1D10AQ9BXI6 508 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 EPB41L4BQ9H329 900 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 DENND2DQ9H6A0 471 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 RXFP1Q9HBX9 757 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 FAM49BQ9NUQ9 324 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 WDR91A4D1P6 747 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 HNRNPRO43390 633 aaKnown RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 KRT7P08729 469 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 SOX4Q06945 474 aaPredicted RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 ACAP1Q15027 740 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 DBN1Q16643 649 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 PRUNE1Q86TP1 453 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 CD99L2Q8TCZ2 262 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 GOLGA2P5Q9HBQ8 144 aa10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
PRPF38B-203ENST00000370025 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms