RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 RSPH10B2B2RC85 870 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 E7EVH7 732 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 AGPSO00116 658 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CNMDO75829 334 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CIAO1O76071 339 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FBXO21O94952 628 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF202O95125 648 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 OR5F1O95221 314 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FBXO45P0C2W1 286 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 RSPH10BP0C881 870 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 POLR2MP0CAP2 368 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CYP2C8P10632 490 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ITGA6P23229 1130 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PRKAR1BP31321 381 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 NR1H2P55055 460 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 USP46P62068 366 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 VSNL1P62760 191 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ITIH4Q14624 930 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CEP78Q5JTW2 689 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 GPR158Q5T848 1215 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ARMCX5Q6P1M9 558 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ZCCHC12Q6PEW1 402 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ZYG11AQ6WRX3 759 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CATSPERGQ6ZRH7 1159 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 Q6ZUG5 572 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 UNC13DQ70J99 1090 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PDZD4Q76G19 769 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 RHOT2Q8IXI1 618 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 OR8H3Q8N146 312 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 EFHBQ8N7U6 833 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 LILRB4Q8NHJ6 448 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CAGE1Q8TC20 777 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 EAF1Q96JC9 268 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 SEC16BQ96JE7 1060 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FAM84BQ96KN1 310 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 AK8Q96MA6 479 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 KCNK17Q96T54 332 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PRPF18Q99633 342 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 RTP3Q9BQQ7 232 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 DHRS4Q9BTZ2 278 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TTLL2Q9BWV7 592 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PRDM5Q9NQX1 630 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ATAD3AQ9NVI7 634 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TBC1D30Q9Y2I9 924 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 SIPA1L1O43166 1804 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TRIOBPQ9H2D6 2365 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 A0A088AWK7 358 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 E2F8A0AVK6 867 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TPP1O14773 563 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 OPLAHO14841 1288 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 GREM1O60565 184 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ALDH1A2O94788 518 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CXCL10P02778 98 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ITGA2BP08514 1039 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 C6P13671 934 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 HSD3B1P14060 373 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 SDSP20132 328 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 M6PRP20645 277 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FGFR2P21802 821 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FUT4P22083 530 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 GSTT1P30711 240 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TLX1P31314 330 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 KPNA1P52294 538 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 OAZ1P54368 228 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CARD18P57730 90 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CSNK2BP67870 215 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 KRT85P78386 507 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 HPCAP84074 193 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ATP8B2P98198 1209 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 SLC14A1Q13336 389 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FRG1Q14331 258 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ANO4Q32M45 955 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ARL13BQ3SXY8 428 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ZCWPW2Q504Y3 356 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 USP39Q53GS9 565 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 SYDE2Q5VT97 1194 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ZC3H14Q6PJT7 736 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TMEM184AQ6ZMB5 413 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ATCAYQ86WG3 371 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 CCDC63Q8NA47 563 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 GOLM1Q8NBJ4 401 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 NKD2Q969F2 451 aaPredicted RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TGS1Q96RS0 853 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TRIM56Q9BRZ2 755 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 OSBPL7Q9BZF2 842 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 ZCWPW1Q9H0M4 648 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 GBA3Q9H227 469 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 EHMT1Q9H9B1 1298 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PIH1D3Q9NQM4 214 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PPP1R14DQ9NXH3 145 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 TBC1D14Q9P2M4 693 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 FAM198AQ9UFP1 575 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 APOBEC2Q9Y235 224 aaKnown RBP5.28□□□□□ -1.56
UBE3D-202ENST00000369746 PPP2R2CQ9Y2T4 447 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 AK5Q9Y6K8 562 aa5.28□□□□□ -1.56
UBE3D-202ENST00000369746 A0A0J9YVX5 310 aa5.27□□□□□ -1.57
UBE3D-202ENST00000369746 GOLGA8IPA6NC78 632 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms