RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 DHX33Q9H6R0 707 aaKnown RBP18.08■□□□□ 0.48
CHTOP-203ENST00000368690 PREBQ9HCU5 417 aa18.08■□□□□ 0.48
CHTOP-203ENST00000368690 CHADO15335 359 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 DENRO43583 198 aaKnown RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 USP2O75604 605 aaPredicted RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 BPGMP07738 259 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 TNNI1P19237 187 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 PRKCHP24723 683 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 CDH5P33151 784 aaPredicted RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 AQP4P55087 323 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SLC25A11Q02978 314 aaKnown RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 CCNIQ14094 377 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 KCNJ11Q14654 390 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MDH1BQ5I0G3 518 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SPOPLQ6IQ16 392 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SATL1Q86VE3 508 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 UNC45BQ8IWX7 931 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MARVELD2Q8N4S9 558 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 UBR7Q8N806 425 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 RDM1Q8NG50 284 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 RILPQ96NA2 401 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 FAM96AQ9H5X1 160 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 DNAAF2Q9NVR5 837 aaKnown RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 PKD2L1Q9P0L9 805 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 ADAMTS6Q9UKP5 1117 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 TTLL3Q9Y4R7 772 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 TMEM150BA6NC51 233 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 APOC4-APOC2K7ER74 178 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 WDR46O15213 610 aaKnown RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 STRNO43815 780 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 APOC2P02655 101 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SPATA31D3P0C874 917 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 FAM200BP0CF97 657 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SMIM18P0DKX4 95 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MYL4P12829 197 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 YWHAGP61981 247 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 HADHQ16836 314 aaKnown RBP18.07■□□□□ 0.48
CHTOP-203ENST00000368690 STXBP5Q5T5C0 1151 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 CES4AQ5XG92 561 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 B3GNT6Q6ZMB0 384 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SPATA31D4Q6ZUB0 917 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 CCDC33Q8N5R6 958 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 SLC25A41Q8N5S1 370 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 TMEM35BQ8NCS4 154 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 PYDC1Q8WXC3 89 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 KCNN1Q92952 543 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MPP4Q96JB8 637 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MAML3Q96JK9 1138 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MECRQ9BV79 373 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 ETNK2Q9NVF9 386 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 MAD1L1Q9Y6D9 718 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 STYXL1Q9Y6J8 313 aa18.07■□□□□ 0.48
CHTOP-203ENST00000368690 A0A0B4J269 797 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 ARHGAP42A6NI28 874 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 WDR64B1ANS9 1081 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 RFPL1O75677 317 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 C6orf222P0C671 652 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 KDELR1P24390 212 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 CRHR1P34998 444 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 COPAP53621 1224 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 HMGCS2P54868 508 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 BACE1P56817 501 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 BASP1P80723 227 aaKnown RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 DLG1Q12959 904 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 STX3Q13277 289 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 TUBB3Q13509 450 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 VGLL4Q14135 290 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 RABGAP1LQ5R372 815 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 KLC3Q6P597 504 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 TRIM74Q86UV6 250 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 TRIM73Q86UV7 250 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 WDR75Q8IWA0 830 aaKnown RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 FNIP1Q8TF40 1166 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 ZFRQ96KR1 1074 aaKnown RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 SH2D3AQ9BRG2 576 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 CSADQ9Y600 493 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 FAM189A1O60320 539 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 L1CAMP32004 1257 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 USP46P62068 366 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 KRT76Q01546 638 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 MTMR1Q13613 665 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 HSP90AA5PQ58FG0 334 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 OGFRL1Q5TC84 451 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 ICA1LQ8NDH6 482 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 ACSF2Q96CM8 615 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 CDCA5Q96FF9 252 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 RPAP3Q9H6T3 665 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 HSFX1Q9UBD0 423 aa18.06■□□□□ 0.48
CHTOP-203ENST00000368690 SAE1Q9UBE0 346 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-203ENST00000368690 MCF2LO15068 1137 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 ZSCAN9O15535 394 aaPredicted RBP18.05■□□□□ 0.48
CHTOP-203ENST00000368690 KRT38O76015 456 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 PEX2P28328 305 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 EIF3EP60228 445 aaKnown RBP18.05■□□□□ 0.48
CHTOP-203ENST00000368690 LPCAT4Q643R3 524 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 TMEM126BQ8IUX1 230 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 SLC26A7Q8TE54 656 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 ZC3H15Q8WU90 426 aaKnown RBP18.05■□□□□ 0.48
CHTOP-203ENST00000368690 Q9H521 79 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms