RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 GAREM2Q75VX8 874 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 WDR75Q8IWA0 830 aaKnown RBP8.72□□□□□ -1.01
YBX3-204ENST00000366290 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
YBX3-204ENST00000366290 CRYGNQ8WXF5 182 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 DYDC2Q96IM9 177 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 CDHR1Q96JP9 859 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 CTAGE1Q96RT6 745 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 LLPHQ9BRT6 129 aaKnown RBP8.72□□□□□ -1.01
YBX3-204ENST00000366290 KATNAL1Q9BW62 490 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 ZMYND12Q9H0C1 365 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 TRPV6Q9H1D0 765 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 CD320Q9NPF0 282 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 ORC3Q9UBD5 711 aaPredicted RBP8.72□□□□□ -1.01
YBX3-204ENST00000366290 CDC42EP3Q9UKI2 254 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 ANKRD6Q9Y2G4 727 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 TANC1Q9C0D5 1861 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 MYO9BQ13459 2157 aa8.72□□□□□ -1.01
YBX3-204ENST00000366290 KAT6AQ92794 2004 aa8.71□□□□□ -1.01
YBX3-204ENST00000366290 TET1Q8NFU7 2136 aa8.71□□□□□ -1.01
YBX3-204ENST00000366290 CDKL5O76039 1030 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 KLHL18O94889 574 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
YBX3-204ENST00000366290 GGPS1O95749 300 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 C5AR1P21730 350 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 HSDL1Q3SXM5 330 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 MCTP2Q6DN12 878 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 CPLX2Q6PUV4 134 aaKnown RBP8.71□□□□□ -1.02
YBX3-204ENST00000366290 TMEM199Q8N511 208 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 GIMAP8Q8ND71 665 aaPredicted RBP8.71□□□□□ -1.02
YBX3-204ENST00000366290 HSPBAP1Q96EW2 488 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 SPATA33Q96N06 139 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 C16orf70Q9BSU1 422 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 TRMT13Q9NUP7 481 aaKnown RBP8.71□□□□□ -1.02
YBX3-204ENST00000366290 POLR3BQ9NW08 1133 aaPredicted RBP8.71□□□□□ -1.02
YBX3-204ENST00000366290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.71□□□□□ -1.02
YBX3-204ENST00000366290 NTMQ9P121 344 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 VPS54Q9P1Q0 977 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 SAE1Q9UBE0 346 aaPredicted RBP8.71□□□□□ -1.02
YBX3-204ENST00000366290 PCDHA6Q9UN73 950 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 UBIAD1Q9Y5Z9 338 aa8.71□□□□□ -1.02
YBX3-204ENST00000366290 A0A0A6YYK5 440 aaPredicted RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 SMCO2A6NFE2 343 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 RFXAPO00287 272 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 DDX3XO00571 662 aaKnown RBP eCLIP8.7□□□□□ -1.02
YBX3-204ENST00000366290 IL33O95760 270 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 KCNA2P16389 499 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 XPAP23025 273 aaPredicted RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 CFPP27918 469 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 SREBF1P36956 1147 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 ADCY7P51828 1080 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 AKAP17AQ02040 695 aaKnown RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 PPIGQ13427 754 aaKnown RBP eCLIP8.7□□□□□ -1.027e-10■□□□□ 8.5
YBX3-204ENST00000366290 TOP3AQ13472 1001 aaPredicted RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 EIF4HQ15056 248 aaKnown RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 UBE2SQ16763 222 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 FAM102BQ5T8I3 360 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 NIPA1Q7RTP0 329 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 MYO1HQ8N1T3 1032 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 CCDC12Q8WUD4 166 aaPredicted RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 NUDT11Q96G61 164 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 GPR20Q99678 358 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 SOX7Q9BT81 388 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 ACE2Q9BYF1 805 aaPredicted RBP8.7□□□□□ -1.02
YBX3-204ENST00000366290 JADE2Q9NQC1 790 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 SH3GLB2Q9NR46 395 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 RTEL1Q9NZ71 1219 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 TUBD1Q9UJT1 453 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 REV3LO60673 3130 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 SCN5AQ14524 2016 aa8.7□□□□□ -1.02
YBX3-204ENST00000366290 NRP2O60462 931 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 NDUFS2O75306 463 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 CYP3A4P08684 503 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 ZNF286BP0CG31 522 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 CSF2RAP15509 400 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 GNA11P29992 359 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 CYP2C18P33260 490 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 KCNQ1P51787 676 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 HMGN5P82970 282 aaKnown RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 KIAA0753Q2KHM9 967 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 ANO4Q32M45 955 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 CEP55Q53EZ4 464 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 ZNF385BQ569K4 471 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 PSRC1Q6PGN9 363 aaPredicted RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 HSCBQ8IWL3 235 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 TPH2Q8IWU9 490 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 MAFAQ8NHW3 353 aaPredicted RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 CAGE1Q8TC20 777 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 DACT3Q96B18 629 aaPredicted RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 MXRA8Q9BRK3 442 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 FDXACB1Q9BRP7 624 aaPredicted RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 MLXIPQ9HAP2 919 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 IL23AQ9NPF7 189 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 DNAI1Q9UI46 699 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 PNMA8BQ9ULN7 279 aaPredicted RBP8.69□□□□□ -1.02
YBX3-204ENST00000366290 KCNJ14Q9UNX9 436 aa8.69□□□□□ -1.02
YBX3-204ENST00000366290 UMODL1Q5DID0 1318 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms