RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 PMLP29590 882 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 ATP5C1P36542 298 aaKnown RBP8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 ASPAP45381 313 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 NOVA1P51513 510 aaKnown RBP8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 VAMP7P51809 220 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 KRT85P78386 507 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 GRAMD4Q6IC98 578 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 SPOPLQ6IQ16 392 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 ARMCX6Q7L4S7 300 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 TMEM25Q86YD3 366 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 ETFBKMTQ8IXQ9 262 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 CRYBG2Q8N1P7 616 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 C12orf29Q8N999 325 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 TERB1Q8NA31 727 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 ZMIZ2Q8NF64 920 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 OLIG1Q8TAK6 271 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 TMEM174Q8WUU8 243 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 PIGKQ92643 395 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 BBS2Q9BXC9 721 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 CSNK1G1Q9HCP0 422 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 TMEM9BQ9NQ34 198 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 DNAJC17Q9NVM6 304 aaKnown RBP8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 CHD8Q9HCK8 2581 aa8.64□□□□□ -1.03
RNU4-59P-201ENST00000364447 A0A0A0MRY4 1105 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 PATE3B3GLJ2 98 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 MAPK13O15264 365 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 CYP26A1O43174 497 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 ADAM23O75077 832 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 KRT37O76014 449 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 TRIM49P0CI25 452 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 TRIM49CP0CI26 452 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 HOXB2P14652 356 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 CD58P19256 250 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 ACO1P21399 889 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 RPL13P26373 211 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 DPP6P42658 865 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 SYKP43405 635 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 GCLMP48507 274 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 SHC2P98077 582 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 INCA1Q0VD86 236 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 LMAN2Q12907 356 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 C10orf120Q5SQS8 335 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 LYSMD4Q5XG99 296 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 SDE2Q6IQ49 451 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 CLEC20AQ6ZU45 233 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 HTR3DQ70Z44 454 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 INTS8Q75QN2 995 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 GPRIN1Q7Z2K8 1008 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 FAM186BQ8IYM0 893 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 TMEFF1Q8IYR6 380 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 PHTF2Q8N3S3 785 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 KCNV2Q8TDN2 545 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 CYFIP2Q96F07 1278 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 XPO6Q96QU8 1125 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 HNRNPABQ99729 332 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 DUSP9Q99956 384 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 NT5C1AQ9BXI3 368 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 KLF16Q9BXK1 252 aaPredicted RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 NUSAP1Q9BXS6 441 aaKnown RBP8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 MMRN2Q9H8L6 949 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 WDR35Q9P2L0 1181 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 NAGPAQ9UK23 515 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 SCML2Q9UQR0 700 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 TRAF3IP3Q9Y228 551 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 PCDHA5Q9Y5H7 936 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 PI4KAP42356 2102 aa8.63□□□□□ -1.03
RNU4-59P-201ENST00000364447 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 ATXN2Q99700 1313 aaKnown RBP8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 A0A1W2PQH9 124 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 AP5Z1O43299 807 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 CACNG3O60359 315 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 RHOBTB3O94955 611 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 TBX18O95935 607 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 CFIP05156 583 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 PRR29P0C7W0 189 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 RARGP13631 454 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 TYRP14679 529 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 GABRG2P18507 467 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 NTSR1P30989 418 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 PSMC2P35998 433 aaKnown RBP8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 WASP42768 502 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 PTGER3P43115 390 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 PGFP49763 221 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 NDUFA8P51970 172 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 IRX4P78413 519 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 RPL6Q02878 288 aaKnown RBP8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 ZNF252P-AS1Q0IIN9 211 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 MAP7D1Q3KQU3 841 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 UAP1L1Q3KQV9 507 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 SPDYCQ5MJ68 293 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 C1orf220Q5T0J3 134 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 SH3PXD2AQ5TCZ1 1133 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 EGFLAMQ63HQ2 1017 aa8.62□□□□□ -1.03
RNU4-59P-201ENST00000364447 SLC36A4Q6YBV0 504 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms