RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ASS1P00966 412 aaKnown RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 NUDT2P50583 147 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ELF3P78545 371 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 GRIK4Q16099 956 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 EEF1DP3Q658K8 133 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 NPNTQ6UXI9 565 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ABTB1Q969K4 478 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 EME1Q96AY2 570 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 APOPT1Q96IL0 206 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 OLFM3Q96PB7 478 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ING2Q9H160 280 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 HACD3Q9P035 362 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ARHGAP26Q9UNA1 814 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ANGPT2O15123 496 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 GJB1P08034 283 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 AVPR1AP37288 418 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ETFBP38117 255 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 TKTL1P51854 596 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 PHEXP78562 749 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 GALNT4Q8N4A0 578 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ALLCQ8N6M5 410 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ADM5C9JUS6 153 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 DNAJC8O75937 253 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 CPA3P15088 417 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 MGAT5Q09328 741 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ADIGQ0VDE8 80 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ACAP1Q15027 740 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 IMPG1Q17R60 797 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 GLB1LQ6UWU2 654 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 LINC00523Q86TU6 105 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 CALML6Q8TD86 181 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 PRCCQ92733 491 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 L3MBTL3Q96JM7 780 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 CDT1Q9H211 546 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 IARS2Q9NSE4 1012 aaKnown RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ABI2Q9NYB9 513 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 NFASCO94856 1347 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 CXCL11O14625 94 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 SKAP2O75563 359 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 ANXA9O76027 345 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 F9P00740 461 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 KCNA2P16389 499 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 VGLL4Q14135 290 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 TTC27Q6P3X3 843 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 CES3Q6UWW8 571 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCAF1-201ENST00000360565 MTFR1LQ9H019 292 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 CHST12Q9NRB3 414 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 NDFIP2Q9NV92 336 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 PCDHA2Q9Y5H9 948 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
SCAF1-201ENST00000360565 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 TIMM44O43615 452 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 NUMBP49757 651 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 SLC6A3Q01959 620 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 MPP3Q13368 585 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 C16orf89Q6UX73 402 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 SLC2A14Q8TDB8 520 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 HTR3CQ8WXA8 447 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 NAF1Q96HR8 494 aaKnown RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 SUFUQ9UMX1 484 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 hCG_1818297A0A087WSY0 165 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 MAFO75444 373 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 SOX11P35716 441 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 YWHAZP63104 245 aaKnown RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 FOXD4Q12950 439 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 N4BP2L1Q5TBK1 243 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 ZCCHC23Q6ZST2 131 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 EFHBQ8N7U6 833 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 ACO2Q99798 780 aaKnown RBP16.86■□□□□ 0.29
SCAF1-201ENST00000360565 A0A0B4J269 797 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 C17orf102A2RUQ5 167 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 E9PBE3 544 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 KLHL41O60662 606 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 KCNA4P22459 653 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 CPT1AP50416 773 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 KCNJ2P63252 427 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 SPIRE1Q08AE8 756 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 ITGA9Q13797 1035 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 BBS12Q6ZW61 710 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 DEFB106AQ8N104 65 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 ADAM32Q8TC27 787 aa16.86■□□□□ 0.29
SCAF1-201ENST00000360565 B4GALT5O43286 388 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 SERPINB5P36952 375 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 OR1G1P47890 313 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 SERPINB8P50452 374 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 MMRN1Q13201 1228 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 TBCCQ15814 346 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 EDEM1Q92611 657 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 WDR27A2RRH5 827 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 KIF1CO43896 1103 aaKnown RBP16.85■□□□□ 0.29
SCAF1-201ENST00000360565 ZNF862O60290 1169 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 SHOX2O60902 331 aaPredicted RBP16.85■□□□□ 0.29
SCAF1-201ENST00000360565 NDUFS3O75489 264 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 IL10P22301 178 aa16.85■□□□□ 0.29
SCAF1-201ENST00000360565 MMP8P22894 467 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms