RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PAEPP09466 180 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 AMPD1P23109 780 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 AQP5P55064 265 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 BBS12Q6ZW61 710 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 SRPK1Q96SB4 655 aaKnown RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 CCDC68Q9H2F9 335 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 GRID1Q9ULK0 1009 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 CCL15-CCL14A0A0B4J2E2 113 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 NCAM1P13591 858 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 HIC1Q14526 733 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 CCL15Q16663 113 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 CYP1B1Q16678 543 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 DGKDQ16760 1214 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 FASTKD1Q53R41 847 aaKnown RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 C1orf220Q5T0J3 134 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 ZCCHC23Q6ZST2 131 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 RIOX2Q8IUF8 465 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 C12orf50Q8NA57 414 aaPredicted RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 ASB7Q9H672 318 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 LZTS1Q9Y250 596 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 HNRNPCL1O60812 293 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 CD48P09326 243 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 MCF2P10911 925 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 AP2B1P63010 937 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 PDK1Q15118 436 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 CELF3Q5SZQ8 465 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 GRAMD4Q6IC98 578 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 CES3Q6UWW8 571 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 MFN1Q8IWA4 741 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 TMEM165Q9HC07 324 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 PDGFCQ9NRA1 345 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 UBQLN1Q9UMX0 589 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 TELO2Q9Y4R8 837 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 TM9SF1O15321 606 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 LRCH4O75427 683 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 CD4P01730 458 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ITGAVP06756 1048 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 KRT16P08779 473 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ATICP31939 592 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 TAF6P49848 677 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ATXN3P54252 364 aaPredicted RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ZBTB17Q13105 803 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ZC3H12AQ5D1E8 599 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 FSCBQ5H9T9 825 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 EFHC1Q5JVL4 640 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 TXNRD3NBQ6F5E7 133 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 TRIML2Q8N7C3 387 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 EPAS1Q99814 870 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 Q9H521 79 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 DDIT4Q9NX09 232 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 KCNK1O00180 336 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 POLBP06746 335 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 CYP2B6P20813 491 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ACO1P21399 889 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 NUMBP49757 651 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 NCALDP61601 193 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 CRADDP78560 199 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 SP2Q02086 613 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 RASA2Q15283 850 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 PAN2Q504Q3 1202 aaKnown RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ITPRIPL1Q6GPH6 555 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 KCNT2Q6UVM3 1135 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 FAM183BPQ6ZVS7 135 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 RMDN2Q96LZ7 410 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 FRMD8Q9BZ67 464 aaPredicted RBP12.68□□□□□ -0.38
COL20A1-201ENST00000358894 MTFR1LQ9H019 292 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 MROH8Q9H579 483 aa12.68□□□□□ -0.38
COL20A1-201ENST00000358894 ATP8B3O60423 1300 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 DDX60Q8IY21 1712 aaKnown RBP12.67□□□□□ -0.38
COL20A1-201ENST00000358894 PDE4DIPQ5VU43 2346 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 SUPT3HO75486 399 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ARL2P36404 184 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 GLIS1Q8NBF1 620 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 OR6P1Q8NGX9 317 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 C20orf96Q9NUD7 363 aaPredicted RBP12.67□□□□□ -0.38
COL20A1-201ENST00000358894 MRPL42Q9Y6G3 142 aaKnown RBP12.67□□□□□ -0.38
COL20A1-201ENST00000358894 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ALOX15BO15296 676 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 LGALS2P05162 132 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 C6orf222P0C671 652 aaPredicted RBP12.67□□□□□ -0.38
COL20A1-201ENST00000358894 TAC1P20366 129 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ACADSBP45954 432 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ANKRD22Q5VYY1 191 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 FITM2Q8N6M3 262 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ADAM32Q8TC27 787 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 GMLQ99445 158 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 UBP1Q9NZI7 540 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
COL20A1-201ENST00000358894 UNC5CO95185 931 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 ABHD2P08910 425 aa12.67□□□□□ -0.38
COL20A1-201ENST00000358894 CDKN2BP42772 138 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms