RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FAF2Q96CS3 445 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SNX27Q96L92 541 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZMAT2Q96NC0 199 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SRPK1Q96SB4 655 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRIM56Q9BRZ2 755 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 EIF2AQ9BY44 585 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 XPNPEP1Q9NQW7 623 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNRF3Q9ULT6 936 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 HEY1Q9Y5J3 304 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 THSD7AQ9UPZ6 1657 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 KLRG2A4D1S0 409 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 MCF2LO15068 1137 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 WDR46O15213 610 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 DGAT1O75907 488 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 OR6B1O95007 311 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 CALB1P05937 261 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 DLDP09622 509 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 IL1R2P27930 398 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TNFSF9P41273 254 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 CLCN2P51788 898 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 EPHB1P54762 984 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 AQP5P55064 265 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 MMRN1Q13201 1228 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRPC3Q13507 836 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 PSMD6Q15008 389 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 IQCF2Q8IXL9 164 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 RBM15BQ8NDT2 890 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 MCPH1Q8NEM0 835 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 PTCD3Q96EY7 689 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TLE6Q9H808 572 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 KCNK13Q9HB14 408 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 CYP4F11Q9HBI6 524 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF70Q9UC06 446 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 BTAF1O14981 1849 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TXNDC9O14530 226 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 HNRNPCL1O60812 293 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 GRAP2O75791 330 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 LYPLA2O95372 231 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TOP3BO95985 862 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC18A1P54219 525 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 PSMC1P62191 440 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 HADHQ16836 314 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 MROH9Q5TGP6 573 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TREML1Q86YW5 311 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 POU5F2Q8N7G0 328 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 GAB3Q8WWW8 586 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 JDP2Q8WYK2 163 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 VCPIP1Q96JH7 1222 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 HAPLN2Q9GZV7 340 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 PXMP2Q9NR77 195 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 CISHQ9NSE2 258 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAIMQ9NVQ4 179 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 DRG1Q9Y295 367 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 SNCAIPQ9Y6H5 919 aa8.55□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SPDYE2BA6NHP3 402 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 H0YIN7 160 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TOM1L1O75674 476 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 LDHAP00338 332 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 APRTP07741 180 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NR3C2P08235 984 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SPDYE6P0CI01 402 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TBXAS1P24557 533 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 RAP1GAPP47736 663 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NEK2P51955 445 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 COG7P83436 770 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 BST1Q10588 318 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 UBAP2LQ14157 1087 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SCYL2Q6P3W7 929 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 C15orf39Q6ZRI6 1047 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NLGN1Q8N2Q7 840 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 EFCAB3Q8N7B9 438 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NAT8LQ8N9F0 302 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 FNDC8Q8TC99 324 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TFAP2BQ92481 460 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NKD2Q969F2 451 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 HSPBAP1Q96EW2 488 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 APOPT1Q96IL0 206 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TUBB6Q9BUF5 446 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 NDE1Q9NXR1 346 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 TSC22D4Q9Y3Q8 395 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 RIPK3Q9Y572 518 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 E2F8A0AVK6 867 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 YDJCA8MPS7 323 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 SPECC1L-ADORA2AF8WAN1 911 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 UGT1A9O60656 530 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 RNASEH1O60930 286 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 LRCH4O75427 683 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 ASNSP08243 561 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 PTGER2P43116 358 aa8.54□□□□□ -1.04
CDC42SE1-201ENST00000357235 EMC2Q15006 297 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms