RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MTMR3Q13615 1198 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 SLC25A52Q3SY17 297 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 BSPRYQ5W0U4 402 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 BNIPLQ7Z465 357 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 SCD5Q86SK9 330 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 SPPL3Q8TCT6 385 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 ACSF2Q96CM8 615 aaPredicted RBP18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 GDF15Q99988 308 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 KLHL11Q9NVR0 708 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 USP18Q9UMW8 372 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 SCML2Q9UQR0 700 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 RWDD3Q9Y3V2 267 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 TRUB2O95900 331 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 ATXN1P54253 815 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 RPL10AP62906 217 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 C2orf54Q08AI8 447 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 DENND5BQ6ZUT9 1274 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 POLNQ7Z5Q5 900 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 ANKS1BQ7Z6G8 1248 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 EDEM1Q92611 657 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 ZWILCHQ9H900 591 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 NMUR1Q9HB89 426 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 RBM12Q9NTZ6 932 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 HSFX1Q9UBD0 423 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 MTUS1Q9ULD2 1270 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 YBX2Q9Y2T7 364 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 FAM92AA1XBS5 289 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 CXCL14O95715 111 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 FGGP02679 453 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 TUFMP49411 452 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 SULT1E1P49888 294 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 CREMQ03060 361 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 HADHQ16836 314 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 SMTNL2Q2TAL5 461 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 TMC7Q7Z402 723 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 EXD1Q8NHP7 514 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 GIPC2Q8TF65 315 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 POF1BQ8WVV4 589 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 ANKRD7Q92527 254 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 TCF25Q9BQ70 676 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 UBE2OQ9C0C9 1292 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 SSX2IPQ9Y2D8 614 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 PCDHA11Q9Y5I1 949 aa18.95■□□□□ 0.62
SMARCD3-202ENST00000356800 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 ENDOD1O94919 500 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 NCAM1P13591 858 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 PBX2P40425 430 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 YWHAGP61981 247 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 KCNT1Q5JUK3 1230 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 SEL1L2Q5TEA6 688 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 STRADAQ7RTN6 431 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 RAPGEF5Q92565 580 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 HERPUD2Q9BSE4 406 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 FBXO44Q9H4M3 255 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 CYP4F11Q9HBI6 524 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 OSER1Q9NX31 292 aa18.94■□□□□ 0.62
SMARCD3-202ENST00000356800 A0A1W2PQH9 124 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 SLC38A8A6NNN8 435 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 PI4K2BG5E9Z4 385 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 CAPN9O14815 690 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 RTN3O95197 1032 aaPredicted RBP18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 KRT1P04264 644 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 KRT7P08729 469 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 RARAP10276 462 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 YWHAQP27348 245 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 CA8P35219 290 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 CAMK1Q14012 370 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 LLGL1Q15334 1064 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 BEND5Q7L4P6 421 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 ANKZF1Q9H8Y5 726 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 GMIPQ9P107 970 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 STAP1Q9ULZ2 295 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 YIPF1Q9Y548 306 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 IRAK3Q9Y616 596 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 ATG2AQ2TAZ0 1938 aa18.93■□□□□ 0.62
SMARCD3-202ENST00000356800 TCRBV7S2A1N4TA0A589 114 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 C3orf70A6NLC5 250 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 HIDE1A8MVS5 230 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 H0YGN5 161 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 CCDC188H7C350 402 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 M0QYT0 321 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 KRIT1O00522 736 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 GRM6O15303 877 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 PRPSAP2O60256 369 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 CSPG5O95196 566 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 ZRANB2O95218 330 aaKnown RBP eCLIP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 RB1P06400 928 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TUBBP07437 444 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 LONRF2Q1L5Z9 754 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 SCYL2Q6P3W7 929 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 MON1AQ86VX9 555 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 TCEAL8Q8IYN2 117 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 ZDHHC14Q8IZN3 488 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 CMASQ8NFW8 434 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 SLC7A14Q8TBB6 771 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 ADAM32Q8TC27 787 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 RNF25Q96BH1 459 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 CEP295NLQ96MC4 621 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 KLHL5Q96PQ7 755 aa18.92■□□□□ 0.62
SMARCD3-202ENST00000356800 SLITRK1Q96PX8 696 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms