RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.77■□□□□ 0.28
PDGFA-201ENST00000354513 CYP26A1O43174 497 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 TRIM49P0CI25 452 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 TRIM49CP0CI26 452 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 PTGER3P43115 390 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 PPP3CAQ08209 521 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 SGSM1Q2NKQ1 1148 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 EOGTQ5NDL2 527 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 UNC93AQ86WB7 457 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 SPRYD3Q8NCJ5 442 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 TAF4BQ92750 862 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 CYLDQ9NQC7 956 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 TMEM74BQ9NUR3 256 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 ANGPTL2Q9UKU9 493 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 WASF3Q9UPY6 502 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 TRAF3IP3Q9Y228 551 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 CFAP47Q6ZTR5 3102 aa16.77■□□□□ 0.28
PDGFA-201ENST00000354513 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 TCRBV21S2A2A0A5A6 115 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 MDM4O15151 490 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 RPN1P04843 607 aaKnown RBP16.76■□□□□ 0.27
PDGFA-201ENST00000354513 GABRG2P18507 467 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 CMA1P23946 247 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 ADORA2BP29275 332 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 PIK3CAP42336 1068 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 DHPSP49366 369 aaPredicted RBP16.76■□□□□ 0.27
PDGFA-201ENST00000354513 IRX4P78413 519 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 PEAR1Q5VY43 1037 aaPredicted RBP16.76■□□□□ 0.27
PDGFA-201ENST00000354513 EGFLAMQ63HQ2 1017 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 ARMCX6Q7L4S7 300 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 TMEFF1Q8IYR6 380 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 TAS1R2Q8TE23 839 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 HMGB4Q8WW32 186 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 ACOX2Q99424 681 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
PDGFA-201ENST00000354513 ATXN2Q99700 1313 aaKnown RBP16.76■□□□□ 0.27
PDGFA-201ENST00000354513 TP53BP1Q12888 1972 aaPredicted RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 A0A1W2PQF6 199 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 IKBKBO14920 756 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 MAPK13O15264 365 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 CACNG3O60359 315 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 ALDH1A2O94788 518 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 CLSTN1O94985 981 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 NFIL3Q16649 462 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 ZCWPW2Q504Y3 356 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 C10orf76Q5T2E6 689 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 TOGARAM2Q6ZUX3 1019 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 ZNF513Q8N8E2 541 aaPredicted RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 PIGKQ92643 395 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 JAKMIP2Q96AA8 810 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 HNRNPABQ99729 332 aaKnown RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 POLMQ9NP87 494 aaPredicted RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 MARK1Q9P0L2 795 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 EVLQ9UI08 416 aaPredicted RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 NUDT5Q9UKK9 219 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 SCML2Q9UQR0 700 aa16.75■□□□□ 0.27
PDGFA-201ENST00000354513 NYNRINQ9P2P1 1898 aaKnown RBP16.75■□□□□ 0.27
PDGFA-201ENST00000354513 A0A1W2PQH9 124 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 PRRT4C9JH25 899 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 KHNYNO15037 678 aaKnown RBP16.74■□□□□ 0.27
PDGFA-201ENST00000354513 CILPO75339 1184 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 RHOBTB3O94955 611 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 FAM200BP0CF97 657 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 P4HA1P13674 534 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 WASP42768 502 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 GCLMP48507 274 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 NOVA1P51513 510 aaKnown RBP16.74■□□□□ 0.27
PDGFA-201ENST00000354513 VAMP7P51809 220 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 NDUFA8P51970 172 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 MCCD1P59942 119 aaPredicted RBP16.74■□□□□ 0.27
PDGFA-201ENST00000354513 DPYDQ12882 1025 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 ANO4Q32M45 955 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 Q6ZNB5 142 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 SCD5Q86SK9 330 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 GOLPH3LQ9H4A5 285 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 FBXO44Q9H4M3 255 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 CD93Q9NPY3 652 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 TMEM9BQ9NQ34 198 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 TLR8Q9NR97 1041 aaKnown RBP16.74■□□□□ 0.27
PDGFA-201ENST00000354513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDGFA-201ENST00000354513 DEC1Q9P2X7 70 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 STARD13Q9Y3M8 1113 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 CEP295Q9C0D2 2601 aa16.74■□□□□ 0.27
PDGFA-201ENST00000354513 TBC1D3BA6NDS4 549 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 TOP3BO95985 862 aaKnown RBP16.73■□□□□ 0.27
PDGFA-201ENST00000354513 MYL1P05976 194 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 HOXB2P14652 356 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 NR2F2P24468 414 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 KIAA1211LQ6NV74 962 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 LPCAT2Q7L5N7 544 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 KCNV2Q8TDN2 545 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 SPACA7Q96KW9 195 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 NIF3L1Q9GZT8 377 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 FSCN3Q9NQT6 498 aa16.73■□□□□ 0.27
PDGFA-201ENST00000354513 DNAJC17Q9NVM6 304 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms