RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 GLTPD2A6NH11 291 aa18.88■□□□□ 0.61
APP-203ENST00000354192 USP12O75317 370 aa18.88■□□□□ 0.61
APP-203ENST00000354192 TOP3BO95985 862 aaKnown RBP18.88■□□□□ 0.61
APP-203ENST00000354192 MAP3K7CLP57077 242 aa18.88■□□□□ 0.61
APP-203ENST00000354192 MCCD1P59942 119 aaPredicted RBP18.88■□□□□ 0.61
APP-203ENST00000354192 ZBTB16Q05516 673 aa18.88■□□□□ 0.61
APP-203ENST00000354192 NIPA2Q8N8Q9 360 aa18.88■□□□□ 0.61
APP-203ENST00000354192 C2orf69Q8N8R5 385 aa18.88■□□□□ 0.61
APP-203ENST00000354192 CXorf38Q8TB03 319 aa18.88■□□□□ 0.61
APP-203ENST00000354192 WDR83Q9BRX9 315 aaKnown RBP18.88■□□□□ 0.61
APP-203ENST00000354192 LRRC4Q9HBW1 653 aa18.88■□□□□ 0.61
APP-203ENST00000354192 C2CD2Q9Y426 696 aa18.88■□□□□ 0.61
APP-203ENST00000354192 TCRBV9S1A1TA0A576 114 aa18.88■□□□□ 0.61
APP-203ENST00000354192 CASTOR2A6NHX0 329 aa18.88■□□□□ 0.61
APP-203ENST00000354192 CPP00450 1065 aa18.88■□□□□ 0.61
APP-203ENST00000354192 RPSAP08865 295 aaKnown RBP18.88■□□□□ 0.61
APP-203ENST00000354192 SULT1E1P49888 294 aa18.88■□□□□ 0.61
APP-203ENST00000354192 HDAC4P56524 1084 aa18.88■□□□□ 0.61
APP-203ENST00000354192 C9orf57Q5W0N0 161 aa18.88■□□□□ 0.61
APP-203ENST00000354192 WSCD1Q658N2 575 aa18.88■□□□□ 0.61
APP-203ENST00000354192 KCNT2Q6UVM3 1135 aa18.88■□□□□ 0.61
APP-203ENST00000354192 TP53INP2Q8IXH6 220 aa18.88■□□□□ 0.61
APP-203ENST00000354192 DEFB106AQ8N104 65 aa18.88■□□□□ 0.61
APP-203ENST00000354192 NAT8LQ8N9F0 302 aa18.88■□□□□ 0.61
APP-203ENST00000354192 TBCBQ99426 244 aa18.88■□□□□ 0.61
APP-203ENST00000354192 ACTR5Q9H9F9 607 aaPredicted RBP18.88■□□□□ 0.61
APP-203ENST00000354192 UBN1Q9NPG3 1134 aa18.88■□□□□ 0.61
APP-203ENST00000354192 FLRT1Q9NZU1 646 aa18.88■□□□□ 0.61
APP-203ENST00000354192 EIF4E1BA6NMX2 242 aaKnown RBP18.87■□□□□ 0.61
APP-203ENST00000354192 KCNK1O00180 336 aa18.87■□□□□ 0.61
APP-203ENST00000354192 LPXNO60711 386 aa18.87■□□□□ 0.61
APP-203ENST00000354192 PGK1P00558 417 aa18.87■□□□□ 0.61
APP-203ENST00000354192 MFSD10Q14728 455 aa18.87■□□□□ 0.61
APP-203ENST00000354192 LDLRAD1Q5T700 205 aa18.87■□□□□ 0.61
APP-203ENST00000354192 PLCD3Q8N3E9 789 aa18.87■□□□□ 0.61
APP-203ENST00000354192 EDEM1Q92611 657 aa18.87■□□□□ 0.61
APP-203ENST00000354192 MECRQ9BV79 373 aa18.87■□□□□ 0.61
APP-203ENST00000354192 ARL2BPQ9Y2Y0 163 aa18.87■□□□□ 0.61
APP-203ENST00000354192 L3MBTL1Q9Y468 752 aa18.87■□□□□ 0.61
APP-203ENST00000354192 GABBR2O75899 941 aa18.87■□□□□ 0.61
APP-203ENST00000354192 GRM5P41594 1212 aa18.87■□□□□ 0.61
APP-203ENST00000354192 PCGF5Q86SE9 256 aa18.87■□□□□ 0.61
APP-203ENST00000354192 LRRC6Q86X45 466 aa18.87■□□□□ 0.61
APP-203ENST00000354192 AP5M1Q9H0R1 490 aa18.87■□□□□ 0.61
APP-203ENST00000354192 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.87■□□□□ 0.614e-7■■□□□ 11.4
APP-203ENST00000354192 TRIM49D1C9J1S8 452 aa18.87■□□□□ 0.61
APP-203ENST00000354192 STRNO43815 780 aa18.87■□□□□ 0.61
APP-203ENST00000354192 BEST1O76090 585 aa18.87■□□□□ 0.61
APP-203ENST00000354192 ABCG1P45844 678 aa18.87■□□□□ 0.61
APP-203ENST00000354192 OLFML1Q6UWY5 402 aa18.87■□□□□ 0.61
APP-203ENST00000354192 CXCL17Q6UXB2 119 aa18.87■□□□□ 0.61
APP-203ENST00000354192 PIGZQ86VD9 579 aa18.87■□□□□ 0.61
APP-203ENST00000354192 PARP9Q8IXQ6 854 aa18.87■□□□□ 0.61
APP-203ENST00000354192 MPP5Q8N3R9 675 aa18.87■□□□□ 0.61
APP-203ENST00000354192 MAGEB18Q96M61 343 aa18.87■□□□□ 0.61
APP-203ENST00000354192 APOL2Q9BQE5 337 aa18.87■□□□□ 0.61
APP-203ENST00000354192 RHOBTB2Q9BYZ6 727 aa18.87■□□□□ 0.61
APP-203ENST00000354192 SLC5A4Q9NY91 659 aa18.87■□□□□ 0.61
APP-203ENST00000354192 HAO1Q9UJM8 370 aa18.87■□□□□ 0.61
APP-203ENST00000354192 MKI67P46013 3256 aaKnown RBP18.87■□□□□ 0.61
APP-203ENST00000354192 SETDB1Q15047 1291 aa18.86■□□□□ 0.61
APP-203ENST00000354192 MDH1BQ5I0G3 518 aa18.86■□□□□ 0.61
APP-203ENST00000354192 YTHDF3Q7Z739 585 aaKnown RBP18.86■□□□□ 0.61
APP-203ENST00000354192 ADGRF2Q8IZF7 708 aa18.86■□□□□ 0.61
APP-203ENST00000354192 ARRDC4Q8NCT1 418 aa18.86■□□□□ 0.61
APP-203ENST00000354192 GAD1Q99259 594 aa18.86■□□□□ 0.61
APP-203ENST00000354192 CXorf49A8MYA2 514 aaPredicted RBP18.86■□□□□ 0.61
APP-203ENST00000354192 CBX6O95503 412 aa18.86■□□□□ 0.61
APP-203ENST00000354192 METTL18O95568 372 aa18.86■□□□□ 0.61
APP-203ENST00000354192 TKTP29401 623 aaKnown RBP18.86■□□□□ 0.61
APP-203ENST00000354192 GMPRP36959 345 aa18.86■□□□□ 0.61
APP-203ENST00000354192 SNX17Q15036 470 aa18.86■□□□□ 0.61
APP-203ENST00000354192 GNASQ5JWF2 1037 aa18.86■□□□□ 0.61
APP-203ENST00000354192 ECHDC2Q86YB7 292 aa18.86■□□□□ 0.61
APP-203ENST00000354192 CNPY4Q8N129 248 aa18.86■□□□□ 0.61
APP-203ENST00000354192 SIX6OS1Q8N1H7 587 aa18.86■□□□□ 0.61
APP-203ENST00000354192 RNF34Q969K3 372 aa18.86■□□□□ 0.61
APP-203ENST00000354192 KLC2Q9H0B6 622 aa18.86■□□□□ 0.61
APP-203ENST00000354192 PPME1Q9Y570 386 aa18.86■□□□□ 0.61
APP-203ENST00000354192 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
APP-203ENST00000354192 M0QYT0 321 aa18.85■□□□□ 0.61
APP-203ENST00000354192 DARSP14868 501 aaKnown RBP18.85■□□□□ 0.61
APP-203ENST00000354192 SAT1P21673 171 aa18.85■□□□□ 0.61
APP-203ENST00000354192 NOMO1Q15155 1222 aa18.85■□□□□ 0.61
APP-203ENST00000354192 SNCBQ16143 134 aa18.85■□□□□ 0.61
APP-203ENST00000354192 BOLA3Q53S33 107 aa18.85■□□□□ 0.61
APP-203ENST00000354192 HEATR6Q6AI08 1181 aaKnown RBP18.85■□□□□ 0.61
APP-203ENST00000354192 TRMT10BQ6PF06 316 aaKnown RBP18.85■□□□□ 0.61
APP-203ENST00000354192 PQLC3Q8N755 202 aa18.85■□□□□ 0.61
APP-203ENST00000354192 CYTH2Q99418 400 aa18.85■□□□□ 0.61
APP-203ENST00000354192 PARK7Q99497 189 aaKnown RBP18.85■□□□□ 0.61
APP-203ENST00000354192 NUDT5Q9UKK9 219 aa18.85■□□□□ 0.61
APP-203ENST00000354192 MLH1P40692 756 aa18.85■□□□□ 0.61
APP-203ENST00000354192 ZNF157P51786 506 aaPredicted RBP18.85■□□□□ 0.61
APP-203ENST00000354192 CGB2Q6NT52 195 aa18.85■□□□□ 0.61
APP-203ENST00000354192 CEP128Q6ZU80 1094 aa18.85■□□□□ 0.61
APP-203ENST00000354192 SHCBP1Q8NEM2 672 aa18.85■□□□□ 0.61
APP-203ENST00000354192 FNIP1Q8TF40 1166 aa18.85■□□□□ 0.61
APP-203ENST00000354192 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
APP-203ENST00000354192 SNX27Q96L92 541 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms