RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CPNE8Q86YQ8 564 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 GOLGA1Q92805 767 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 CFAP57Q96MR6 1250 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 NSUN3Q9H649 340 aaKnown RBP28.32■■■□□ 2.12
SSBP4-202ENST00000348495 ABCC13Q9NSE7 274 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 LMCD1Q9NZU5 365 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 TMEM110-MUSTN1A8MSY1 372 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 RFPL2O75678 378 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 SDC4P31431 198 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 PSEN1P49768 467 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 DCAF6Q58WW2 860 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 SNX30Q5VWJ9 437 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 NT5DC3Q86UY8 548 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 VN1R2Q8NFZ6 395 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 PPP2R3CQ969Q6 453 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 LRRC3Q9BY71 257 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 ADAM33Q9BZ11 813 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 PRDM12Q9H4Q4 367 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 TLR8Q9NR97 1041 aaKnown RBP28.31■■■□□ 2.12
SSBP4-202ENST00000348495 CLIC5Q9NZA1 410 aa28.31■■■□□ 2.12
SSBP4-202ENST00000348495 PAPLNO95428 1278 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 TUBB4AP04350 444 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 HNRNPA1P09651 372 aaKnown RBP eCLIP28.3■■■□□ 2.12
SSBP4-202ENST00000348495 NCAM1P13591 858 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 COMTP21964 271 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 SLC1A1P43005 524 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 RBM10P98175 930 aaKnown RBP28.3■■■□□ 2.12
SSBP4-202ENST00000348495 ACAP1Q15027 740 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 BNIPLQ7Z465 357 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 ARFGAP1Q8N6T3 406 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 EDEM1Q92611 657 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 CENPIQ92674 756 aaPredicted RBP28.3■■■□□ 2.12
SSBP4-202ENST00000348495 NPY6RQ99463 290 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 HYOU1Q9Y4L1 999 aa28.3■■■□□ 2.12
SSBP4-202ENST00000348495 KIF2AO00139 706 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 FTCDO95954 541 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 POU2F2P09086 479 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 GTF2F1P35269 517 aaKnown RBP eCLIP28.29■■■□□ 2.121e-6■■■■□ 26.2
SSBP4-202ENST00000348495 GRIN2CQ14957 1233 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 TAF12Q16514 161 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 SLC25A52Q3SY17 297 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 OTUD1Q5VV17 481 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 PDZD8Q8NEN9 1154 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 IL21Q9HBE4 155 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 ZNF334Q9HCZ1 680 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 ZDHHC7Q9NXF8 308 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 UXTQ9UBK9 157 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 CAPN9O14815 690 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 TFE3P19532 575 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 C15orf59Q2T9L4 293 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 SH3PXD2AQ5TCZ1 1133 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 BTBD8Q5XKL5 378 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 TMC8Q8IU68 726 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 ZNF512Q96ME7 567 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-202ENST00000348495 JRKLQ9Y4A0 524 aa28.29■■■□□ 2.12
SSBP4-202ENST00000348495 CCL16O15467 120 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 TADA3O75528 432 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 PITX1P78337 314 aaPredicted RBP28.28■■■□□ 2.12
SSBP4-202ENST00000348495 HYAL1Q12794 435 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 TCEAL5Q5H9L2 206 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 MEI1Q5TIA1 1274 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 DAB2IPQ5VWQ8 1189 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 ELMSAN1Q6PJG2 1045 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 SYT10Q6XYQ8 523 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 PEX26Q7Z412 305 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 TMEM150AQ86TG1 271 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 CD101Q93033 1021 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.28■■■□□ 2.12
SSBP4-202ENST00000348495 RRN3Q9NYV6 651 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 STAP1Q9ULZ2 295 aa28.28■■■□□ 2.12
SSBP4-202ENST00000348495 ZNF840PA6NDX5 716 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 LRCH4O75427 683 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 ENDOD1O94919 500 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 TNNT1P13805 278 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 ATP11AP98196 1134 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 TMEM184AQ6ZMB5 413 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 ELMOD1Q8N336 334 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 ZNF276Q8N554 614 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 TBCBQ99426 244 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 CALCOCO1Q9P1Z2 691 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 DNAI1Q9UI46 699 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 AMFRQ9UKV5 643 aa28.27■■■□□ 2.12
SSBP4-202ENST00000348495 F11P03951 625 aa28.26■■■□□ 2.12
SSBP4-202ENST00000348495 POU3F3P20264 500 aaPredicted RBP28.26■■■□□ 2.12
SSBP4-202ENST00000348495 PPP3CCP48454 512 aa28.26■■■□□ 2.12
SSBP4-202ENST00000348495 DQX1Q8TE96 717 aaKnown RBP28.26■■■□□ 2.12
SSBP4-202ENST00000348495 FAM172AQ8WUF8 416 aa28.26■■■□□ 2.12
SSBP4-202ENST00000348495 UBE2Q2Q8WVN8 375 aa28.26■■■□□ 2.12
SSBP4-202ENST00000348495 EPHA5P54756 1037 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 HDAC4P56524 1084 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 RAB6CQ53S08 254 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 CC2D1AQ6P1N0 951 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-202ENST00000348495 MSANTD2Q6P1R3 559 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 STRADAQ7RTN6 431 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 EFHBQ8N7U6 833 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 ZNF707Q96C28 371 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-202ENST00000348495 PGAP3Q96FM1 320 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-202ENST00000348495 HES6Q96HZ4 224 aa28.26■■■□□ 2.11
SSBP4-202ENST00000348495 TLR10Q9BXR5 811 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms