RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PSMD7P51665 324 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 DMP1Q13316 513 aaPredicted RBP15.41■□□□□ 0.06
CLCN1-201ENST00000343257 SNAPC2Q13487 334 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 SH3BP5LQ7L8J4 393 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 GPD1LQ8N335 351 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 KCTD6Q8NC69 237 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 USP13Q92995 863 aaPredicted RBP15.41■□□□□ 0.06
CLCN1-201ENST00000343257 DOLKQ9UPQ8 538 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 NDC80O14777 642 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 STAT2P52630 851 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 CUL2Q13617 745 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 KRT81Q14533 505 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 ZBTB41Q5SVQ8 909 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 ZNF554Q86TJ5 538 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 JOSD2Q8TAC2 188 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 TFB1MQ8WVM0 346 aaKnown RBP15.41■□□□□ 0.06
CLCN1-201ENST00000343257 MOCOSQ96EN8 888 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 ZBTB45Q96K62 511 aaPredicted RBP15.41■□□□□ 0.06
CLCN1-201ENST00000343257 LRGUKQ96M69 825 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 NUB1Q9Y5A7 615 aa15.41■□□□□ 0.06
CLCN1-201ENST00000343257 TRMUO75648 421 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 BPGMP07738 259 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 MYCLP12524 364 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 RFC1P35251 1148 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 SERPINB8P50452 374 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 EMP3P54852 163 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 PKNOX1P55347 436 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 NLRP11P59045 1033 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 MPP3Q13368 585 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 ORC1Q13415 861 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 ITGA9Q13797 1035 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 FAM91A1Q658Y4 838 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 ATG14Q6ZNE5 492 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 PTAR1Q7Z6K3 402 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 GSDMBQ8TAX9 411 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 TEKT1Q969V4 418 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 MFSD14AQ96MC6 490 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 NDUFA13Q9P0J0 144 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 MYH9P35579 1960 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 CNTNAP2Q9UHC6 1331 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 NOP56O00567 594 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 RPS6KA4O75676 772 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 ACO1P21399 889 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 SH3BGRP55822 239 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 CDKL1Q00532 357 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 NRF1Q16656 503 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 AOC3Q16853 763 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 PDPK2PQ6A1A2 396 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 PGBD4Q96DM1 585 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 MXRA8Q9BRK3 442 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 SENP6Q9GZR1 1112 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 GNEQ9Y223 722 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 SF3B1O75533 1304 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 STRCP1A6NGW2 1772 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 GOLGA8QA0A0J9YX86 632 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 GOLGA8OA6NCC3 632 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 E7ESA3 106 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 GOLGA8NF8WBI6 632 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 CCNT2O60583 730 aaKnown RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 APRTP07741 180 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 SERPINB5P36952 375 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 HDAC4P56524 1084 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 CC2D2BQ6DHV5 1058 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 RNF168Q8IYW5 571 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 ADAM32Q8TC27 787 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 ZNF512Q96ME7 567 aaPredicted RBP15.4■□□□□ 0.06
CLCN1-201ENST00000343257 YIPF2Q9BWQ6 316 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 SIRPGQ9P1W8 387 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 TTLL3Q9Y4R7 772 aa15.4■□□□□ 0.06
CLCN1-201ENST00000343257 KLF11O14901 512 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 VNN1O95497 513 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 AOC1P19801 751 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 ADGRG6Q86SQ4 1221 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 ZNF677Q86XU0 584 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 PHF13Q86YI8 300 aaPredicted RBP15.39■□□□□ 0.05
CLCN1-201ENST00000343257 CPXCR1Q8N123 301 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 PQLC1Q8N2U9 271 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 RNPEPQ9H4A4 650 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 SUDS3Q9H7L9 328 aaPredicted RBP15.39■□□□□ 0.05
CLCN1-201ENST00000343257 AFG3L2Q9Y4W6 797 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 GMEB1Q9Y692 573 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 MCF2LO15068 1137 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 VIL1P09327 827 aaKnown RBP15.39■□□□□ 0.05
CLCN1-201ENST00000343257 MMP8P22894 467 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 RPL10P27635 214 aaKnown RBP15.39■□□□□ 0.05
CLCN1-201ENST00000343257 SLC1A6P48664 564 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 EML3Q32P44 896 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 SLC44A4Q53GD3 710 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 HSP90AA5PQ58FG0 334 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 ENOSF1Q7L5Y1 443 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 MAVSQ7Z434 540 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 KIAA0319LQ8IZA0 1049 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 FBXW8Q8N3Y1 598 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 TRIML2Q8N7C3 387 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 PIWIL2Q8TC59 973 aaKnown RBP15.39■□□□□ 0.05
CLCN1-201ENST00000343257 TMC2Q8TDI7 906 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 DCUN1D5Q9BTE7 237 aa15.39■□□□□ 0.05
CLCN1-201ENST00000343257 FETUBQ9UGM5 382 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms