RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 DCAF6Q58WW2 860 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 RAB41Q5JT25 222 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 HFE2Q6ZVN8 426 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 THEM5Q8N1Q8 247 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 CCDC185Q8N715 623 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 OR10T2Q8NGX3 314 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.84■□□□□ 0.93
RTN1-202ENST00000342503 SLC2A13Q96QE2 648 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 ADAM7Q9H2U9 754 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 PCDH9Q9HC56 1237 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 TMLHEQ9NVH6 421 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 PCDHB8Q9UN66 801 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 IFNB1P01574 187 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 SHBGP04278 402 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 NUDT17P0C025 328 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 MYZAPP0CAP1 466 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 TYMPP19971 482 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 L1CAMP32004 1257 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 NOS2P35228 1153 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 GDF10P55107 478 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 DAOAP59103 153 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 OTUD1Q5VV17 481 aaPredicted RBP20.84■□□□□ 0.93
RTN1-202ENST00000342503 VSIG1Q86XK7 387 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 COLGALT2Q8IYK4 626 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 SH2D3CQ8N5H7 860 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 PQLC3Q8N755 202 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 PCDH19Q8TAB3 1148 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 ATP6V1G3Q96LB4 118 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 PWWP2AQ96N64 755 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 DEFB118Q96PH6 123 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 DHX35Q9H5Z1 703 aaKnown RBP20.84■□□□□ 0.93
RTN1-202ENST00000342503 LRRC4CQ9HCJ2 640 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 CSNK1G1Q9HCP0 422 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 PAK6Q9NQU5 681 aaPredicted RBP20.84■□□□□ 0.93
RTN1-202ENST00000342503 TBC1D13Q9NVG8 400 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 AP4E1Q9UPM8 1137 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 ARHGEF37A1IGU5 675 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 MCF2LO15068 1137 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 RIPK2O43353 540 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 EIF3BP55884 814 aaKnown RBP20.83■□□□□ 0.92
RTN1-202ENST00000342503 PITX1P78337 314 aaPredicted RBP20.83■□□□□ 0.92
RTN1-202ENST00000342503 IFFO1Q0D2I5 559 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 SLC29A2Q14542 456 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 NOMO1Q15155 1222 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 MTFR1Q15390 333 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 DPYSL2Q16555 572 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 PPP6R3Q5H9R7 873 aaPredicted RBP20.83■□□□□ 0.92
RTN1-202ENST00000342503 C1orf228Q6PIY5 440 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 LRRTM3Q86VH5 581 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 RSAD2Q8WXG1 361 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 P3H4Q92791 437 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 FAF2Q96CS3 445 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 NPY6RQ99463 290 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 ZNF670Q9BS34 389 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 MAGEB5Q9BZ81 275 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 TSPYL1Q9H0U9 437 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 CDC42EP4Q9H3Q1 356 aaKnown RBP20.83■□□□□ 0.92
RTN1-202ENST00000342503 CENPHQ9H3R5 247 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 POPDC2Q9HBU9 364 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 CNGB3Q9NQW8 809 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 DNAJC17Q9NVM6 304 aaKnown RBP20.83■□□□□ 0.92
RTN1-202ENST00000342503 TMEM161AQ9NX61 479 aa20.83■□□□□ 0.92
RTN1-202ENST00000342503 TPX2Q9ULW0 747 aaKnown RBP20.83■□□□□ 0.92
RTN1-202ENST00000342503 ENPP3O14638 875 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 APOL1O14791 398 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 RBP3P10745 1247 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 BDNFP23560 247 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 OR1G1P47890 313 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 PLEKHG4Q58EX7 1191 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 SYPL2Q5VXT5 272 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 SLC9A4Q6AI14 798 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 TRMT10CQ7L0Y3 403 aaKnown RBP20.82■□□□□ 0.92
RTN1-202ENST00000342503 BNIPLQ7Z465 357 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 UNC45BQ8IWX7 931 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 PLD5Q8N7P1 536 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 DBF4BQ8NFT6 615 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 NT5C3BQ969T7 300 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 KCTD15Q96SI1 283 aaPredicted RBP20.82■□□□□ 0.92
RTN1-202ENST00000342503 PSD3Q9NYI0 1048 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 KANSL3Q9P2N6 904 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 NAALADL1Q9UQQ1 740 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 PATJQ8NI35 1801 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 BRCA2P51587 3418 aa20.82■□□□□ 0.92
RTN1-202ENST00000342503 YJEFN3A6XGL0 299 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 ZNF487B1APH4 448 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 HMGB1P1B2RPK0 211 aaPredicted RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 E7ENQ6 273 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 FYNP06241 537 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 USP17L7P0C7H9 530 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 TGM2P21980 687 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 RNASELQ05823 741 aaKnown RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 FAM131BQ86XD5 332 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 MTMR10Q9NXD2 777 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.81■□□□□ 0.92
RTN1-202ENST00000342503 DNAJB4Q9UDY4 337 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 FZD10Q9ULW2 581 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 STAP1Q9ULZ2 295 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 SCN5AQ14524 2016 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 SYNJ2BP-COX16A0A087WUM0 186 aa20.81■□□□□ 0.92
RTN1-202ENST00000342503 M0QYT0 321 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms