RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MMP13P45452 471 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 CLUL1Q15846 466 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 HADHQ16836 314 aaKnown RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 HHATQ5VTY9 493 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 USP17L7P0C7H9 530 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 HSPA6P17066 643 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 AXLP30530 894 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 GPD2P43304 727 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 SCTRP47872 440 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 CCDC38Q502W7 563 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 FAM172AQ8WUF8 416 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 EZH1Q92800 747 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 TNIP3Q96KP6 325 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
COL18A1-201ENST00000342220 MTRF1LQ9UGC7 380 aaKnown RBP13.62□□□□□ -0.23
COL18A1-201ENST00000342220 CST8O60676 142 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 PYGBP11216 843 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CCL5P13501 91 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 MIPP30301 263 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 COILP38432 576 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-201ENST00000342220 GRIK1P39086 918 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 TLE2Q04725 743 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CNGA2Q16280 664 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CD101Q93033 1021 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CYP3A43Q9HB55 503 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 SEPT10Q9P0V9 454 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 WDR81Q562E7 1941 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 PIAS1O75925 651 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 ACRP10323 421 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 NEFHP12036 1026 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 PTPN1P18031 435 aaKnown RBP13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CALCOCO2Q13137 446 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 CCT6BQ92526 530 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 PRMT1Q99873 361 aaKnown RBP13.61□□□□□ -0.23
COL18A1-201ENST00000342220 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
COL18A1-201ENST00000342220 SUDS3Q9H7L9 328 aaPredicted RBP13.61□□□□□ -0.23
COL18A1-201ENST00000342220 H7C0C1 242 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 RIPK2O43353 540 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 RTN3O95197 1032 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-201ENST00000342220 ATP5OP48047 213 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 IFNAR2P48551 515 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 PITX1P78337 314 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-201ENST00000342220 SIX1Q15475 284 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-201ENST00000342220 LRRC8DQ7L1W4 858 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 ANKS1BQ7Z6G8 1248 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 XYLT1Q86Y38 959 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 SLAIN1Q8ND83 568 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 TMEM121Q9BTD3 319 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 CEP41Q9BYV8 373 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 HIPK3Q9H422 1215 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 NOD2Q9HC29 1040 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 CNTN3Q9P232 1028 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 TRIP11Q15643 1979 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 TMEM191CA6NGB0 347 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 CPB1P15086 417 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 IL1R2P27930 398 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 KRT17Q04695 432 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 MBTPS1Q14703 1052 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 TCEAL1Q15170 157 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 C6orf118Q5T5N4 469 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 FAXCQ5TGI0 409 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 LHX8Q68G74 356 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 PHF13Q86YI8 300 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-201ENST00000342220 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
COL18A1-201ENST00000342220 SLC27A5Q9Y2P5 690 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 PCDHB7Q9Y5E2 793 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 HMBSP08397 361 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 DESP17661 470 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 RPL17P18621 184 aaKnown RBP13.6□□□□□ -0.23
COL18A1-201ENST00000342220 TKTL1P51854 596 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 ZNF132P52740 706 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 FAM171A1Q5VUB5 890 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 CCDC197Q8NCU1 140 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 FAM167BQ9BTA0 163 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 TMEM165Q9HC07 324 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 UNC80Q8N2C7 3258 aa13.6□□□□□ -0.23
COL18A1-201ENST00000342220 ACSL3O95573 720 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 NCAM1P13591 858 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 MTA1Q13330 715 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 OVOS1Q6IE37 1185 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 MAGEC3Q8TD91 643 aa13.59□□□□□ -0.23
COL18A1-201ENST00000342220 KBTBD7Q8WVZ9 684 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms