RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 AMPD1P23109 780 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 GRIA1P42261 906 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 MFSD10Q14728 455 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 AGGF1Q8N302 714 aaeCLIP10.76□□□□□ -0.69
LIMA1-201ENST00000341247 ARRDC4Q8NCT1 418 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 TCP10LQ8TDR4 215 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 TBC1D31Q96DN5 1066 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 USP29Q9HBJ7 922 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 ETNK1Q9HBU6 452 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 DCTN4Q9UJW0 460 aa10.76□□□□□ -0.69
LIMA1-201ENST00000341247 KPNA7A9QM74 516 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 CTSHP09668 335 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 TKTP29401 623 aaKnown RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 FAAP100Q0VG06 881 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 SLC10A2Q12908 348 aaPredicted RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 PTK7Q13308 1070 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 SNX17Q15036 470 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 E2F5Q15329 346 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 LACTB2Q53H82 288 aaPredicted RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 EFHC2Q5JST6 749 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 ECHDC2Q86YB7 292 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 RIBC1Q8N443 379 aaPredicted RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 EMID1Q96A84 441 aaPredicted RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 SEPT10Q9P0V9 454 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 MRPL42Q9Y6G3 142 aaKnown RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 UGT1A9O60656 530 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 NDUFV1P49821 464 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 CRADDP78560 199 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 SLC20A2Q08357 652 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 NME3Q13232 169 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 BMPR2Q13873 1038 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 KYAT1Q16773 422 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 BOLA3Q53S33 107 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 KBTBD7Q8WVZ9 684 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 TBCBQ99426 244 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 SLC4A5Q9BY07 1137 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 UGT1A7Q9HAW7 530 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 UGT1A10Q9HAW8 530 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 UGT1A8Q9HAW9 530 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 MAGED2Q9UNF1 606 aaPredicted RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 AP4E1Q9UPM8 1137 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 BEST1O76090 585 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 OAS1P00973 400 aaKnown RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 MT-ND3P03897 115 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 INHBAP08476 426 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 GOT1P17174 413 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 STIP1P31948 543 aaKnown RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 AFF1P51825 1210 aaKnown RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 ADIGQ0VDE8 80 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 ACAP1Q15027 740 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 MTFR1Q15390 333 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 DCAF6Q58WW2 860 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 CST9Q5W186 159 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 IQSEC1Q6DN90 963 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 APPL2Q8NEU8 664 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 TTC17Q96AE7 1141 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 PARK7Q99497 189 aaKnown RBP10.75□□□□□ -0.69
LIMA1-201ENST00000341247 ACSS3Q9H6R3 686 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 KIAA1257Q9ULG3 409 aa10.75□□□□□ -0.69
LIMA1-201ENST00000341247 IQCA1LA6NCM1 817 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 CXorf49A8MYA2 514 aaPredicted RBP10.74□□□□□ -0.69
LIMA1-201ENST00000341247 CREB3O43889 395 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 METTL18O95568 372 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
LIMA1-201ENST00000341247 GSCP56915 257 aaPredicted RBP10.74□□□□□ -0.69
LIMA1-201ENST00000341247 FAM47CQ5HY64 1035 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 TMEM110Q86TL2 294 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 RNF169Q8NCN4 708 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 DENND1AQ8TEH3 1009 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 SERAC1Q96JX3 654 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 LGMNQ99538 433 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 NRDE2Q9H7Z3 1164 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 NPHS2Q9NP85 383 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 UBQLN1Q9UMX0 589 aaKnown RBP10.74□□□□□ -0.69
LIMA1-201ENST00000341247 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 A8MUI8 341 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 IGF2BP3O00425 579 aaKnown RBP eCLIP10.74□□□□□ -0.69
LIMA1-201ENST00000341247 NCALDP61601 193 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 ZNF449Q6P9G9 518 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 KCNT2Q6UVM3 1135 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 DENND5BQ6ZUT9 1274 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 OSTM1Q86WC4 334 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 DEFB106AQ8N104 65 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 MPP5Q8N3R9 675 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 DCAKDQ8WVC6 231 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 KLHL29Q96CT2 875 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 ERP27Q96DN0 273 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 PGLYRP2Q96PD5 576 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 FAM111AQ96PZ2 611 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 MED10Q9BTT4 135 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 MORF4L1Q9UBU8 362 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 SLC24A2Q9UI40 661 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 SLC12A4Q9UP95 1085 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 ACTL7BQ9Y614 415 aa10.74□□□□□ -0.69
LIMA1-201ENST00000341247 ENDOD1O94919 500 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms