RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KRBA2Q6ZNG9 492 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 TRMT11Q7Z4G4 463 aaKnown RBP11.26□□□□□ -0.61
CAPN3-202ENST00000337571 TADA2BQ86TJ2 420 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 PLPP6Q8IY26 295 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 TTC39CQ8N584 583 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 TXNDC5Q8NBS9 432 aaKnown RBP11.26□□□□□ -0.61
CAPN3-202ENST00000337571 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 WHAMMQ8TF30 809 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 CHAMP1Q96JM3 812 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 SPACA7Q96KW9 195 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
CAPN3-202ENST00000337571 HNRNPABQ99729 332 aaKnown RBP11.26□□□□□ -0.61
CAPN3-202ENST00000337571 SMOQ99835 787 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 SPHK2Q9NRA0 654 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 MYOFQ9NZM1 2061 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 FAM92AA1XBS5 289 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
CAPN3-202ENST00000337571 BEST1O76090 585 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 CD58P19256 250 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
CAPN3-202ENST00000337571 GTF2H1P32780 548 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 ASPAP45381 313 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 EMP3P54852 163 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 SLC8A3P57103 927 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 ENPEPQ07075 957 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 DPYDQ12882 1025 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 NFIL3Q16649 462 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 GAB4Q2WGN9 574 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 EMC10Q5UCC4 262 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 HTR3DQ70Z44 454 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 LPCAT2Q7L5N7 544 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 BBS7Q8IWZ6 715 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
CAPN3-202ENST00000337571 IL17RCQ8NAC3 791 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 HEXIM2Q96MH2 286 aaKnown RBP11.25□□□□□ -0.61
CAPN3-202ENST00000337571 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
CAPN3-202ENST00000337571 DUSP9Q99956 384 aaKnown RBP11.25□□□□□ -0.61
CAPN3-202ENST00000337571 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 PCDHA5Q9Y5H7 936 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 THADAQ6YHU6 1953 aa11.25□□□□□ -0.61
CAPN3-202ENST00000337571 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 BCLAF3A2AJT9 711 aaKnown RBP11.24□□□□□ -0.61
CAPN3-202ENST00000337571 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 SGK1O00141 431 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 CETN3O15182 167 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 HOXC11O43248 304 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TULP3O75386 442 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 ZNF202O95125 648 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TRIM49P0CI25 452 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TRIM49CP0CI26 452 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-202ENST00000337571 PLA2G4AP47712 749 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 DHPSP49366 369 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-202ENST00000337571 PPP3CAQ08209 521 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 INCA1Q0VD86 236 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 C10orf76Q5T2E6 689 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 DAB2IPQ5VWQ8 1189 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 KRT39Q6A163 491 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 CLEC20AQ6ZU45 233 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 CYP2U1Q7Z449 544 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 C12orf40Q86WS4 652 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 ZNF513Q8N8E2 541 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-202ENST00000337571 ZMIZ2Q8NF64 920 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 MDGA1Q8NFP4 955 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TAS1R2Q8TE23 839 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
CAPN3-202ENST00000337571 CNTNAP3BQ96NU0 1288 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TMEM8AQ9HCN3 771 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 RXFP3Q9NSD7 469 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 RMND1Q9NWS8 449 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 NAGPAQ9UK23 515 aa11.24□□□□□ -0.61
CAPN3-202ENST00000337571 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 CYP26A1O43174 497 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 TBX18O95935 607 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 EPB41P11171 864 aaKnown RBP11.23□□□□□ -0.61
CAPN3-202ENST00000337571 RALAP11233 206 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 RARGP13631 454 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 KIR2DL1P43626 348 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-202ENST00000337571 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 ZNF394Q53GI3 561 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 C1orf220Q5T0J3 134 aa11.23□□□□□ -0.61
CAPN3-202ENST00000337571 PMS2CLQ68D20 193 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms