RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ATICP31939 592 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 ABCG1P45844 678 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 CACNA2D1P54289 1103 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 MAP3K7CLP57077 242 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 SLC6A3Q01959 620 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 MDH1BQ5I0G3 518 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 KIAA0319Q5VV43 1072 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 SYPL2Q5VXT5 272 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 TRMT10BQ6PF06 316 aaKnown RBP9.21□□□□□ -0.94
SNCA-201ENST00000336904 SPATA21Q7Z572 469 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 BEST2Q8NFU1 509 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 SLC35F5Q8WV83 523 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 CKAP2Q8WWK9 683 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 KCNN1Q92952 543 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 MED10Q9BTT4 135 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 MECRQ9BV79 373 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 NFKBIZQ9BYH8 718 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 PITPNM3Q9BZ71 974 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 SNX25Q9H3E2 840 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 NMRK2Q9NPI5 230 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 TMEM30AQ9NV96 361 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 EURLQ9NYK6 297 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.21□□□□□ -0.94
SNCA-201ENST00000336904 TCRBV9S1A1TA0A576 114 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 ALOX15BO15296 676 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 PGGT1BP53609 377 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 COPS2P61201 443 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 RNASELQ05823 741 aaKnown RBP9.21□□□□□ -0.94
SNCA-201ENST00000336904 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 NOMO1Q15155 1222 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 ZNF449Q6P9G9 518 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 PIGZQ86VD9 579 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 HACE1Q8IYU2 909 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 DEFB106AQ8N104 65 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 PDIK1LQ8N165 341 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 EDEM1Q92611 657 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 PTPRN2Q92932 1015 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 TTC17Q96AE7 1141 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 ATXN7L3BQ96GX2 97 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 SERAC1Q96JX3 654 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 GAD1Q99259 594 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 SLC13A1Q9BZW2 595 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 CYP3A43Q9HB55 503 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 ETNK1Q9HBU6 452 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 NPHS2Q9NP85 383 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 WDR35Q9P2L0 1181 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 AP4E1Q9UPM8 1137 aa9.21□□□□□ -0.94
SNCA-201ENST00000336904 DRG1Q9Y295 367 aaKnown RBP9.21□□□□□ -0.94
SNCA-201ENST00000336904 USP15Q9Y4E8 981 aaPredicted RBP9.21□□□□□ -0.94
SNCA-201ENST00000336904 TTC3P53804 2025 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 APOL1O14791 398 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 STRNO43815 780 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 NEFHP12036 1026 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 CTGFP29279 349 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 GABRB2P47870 512 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 PSEN2P49810 448 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
SNCA-201ENST00000336904 HHATQ5VTY9 493 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 CASC4Q6P4E1 433 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 GPRIN1Q7Z2K8 1008 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 ADGRF2Q8IZF7 708 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 C2orf69Q8N8R5 385 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 ANKLE1Q8NAG6 615 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 CCNYQ8ND76 341 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 TCP10LQ8TDR4 215 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 CENPTQ96BT3 561 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 AGAP3Q96P47 875 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 KCTD15Q96SI1 283 aaPredicted RBP9.2□□□□□ -0.94
SNCA-201ENST00000336904 PARK7Q99497 189 aaKnown RBP9.2□□□□□ -0.94
SNCA-201ENST00000336904 RSAD1Q9HA92 442 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 USP29Q9HBJ7 922 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 BAIAP2L1Q9UHR4 511 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 NUDT5Q9UKK9 219 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 SHOC2Q9UQ13 582 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 INPP5FQ9Y2H2 1132 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 NUMBLQ9Y6R0 609 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 IQCA1LA6NCM1 817 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 KCNK1O00180 336 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 FSBPO95073 299 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 PYGBP11216 843 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 ATP5DP30049 168 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 MSH2P43246 934 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 SULT1E1P49888 294 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 GEMIN4P57678 1058 aaKnown RBP9.2□□□□□ -0.94
SNCA-201ENST00000336904 UBXN11Q5T124 520 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 KCNT2Q6UVM3 1135 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 CEP57Q86XR8 500 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 ECHDC2Q86YB7 292 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 NME8Q8N427 588 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 SMG8Q8ND04 991 aaKnown RBP9.2□□□□□ -0.94
SNCA-201ENST00000336904 C3orf58Q8NDZ4 430 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 APPL2Q8NEU8 664 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 FAM111AQ96PZ2 611 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 ACSS2Q9NR19 701 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 MIOSQ9NXC5 875 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 PSMC3IPQ9P2W1 217 aaPredicted RBP9.2□□□□□ -0.94
SNCA-201ENST00000336904 PPME1Q9Y570 386 aa9.2□□□□□ -0.94
SNCA-201ENST00000336904 NUP205Q92621 2012 aa9.19□□□□□ -0.94
SNCA-201ENST00000336904 A6NJR5 290 aa9.19□□□□□ -0.94
SNCA-201ENST00000336904 FAM72CH0Y354 149 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms