RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 PRKAA2P54646 552 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TGM3Q08188 693 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PTGES3Q15185 160 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 FAM228AQ86W67 206 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PRCCQ92733 491 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 OXNAD1Q96HP4 312 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CITED4Q96RK1 184 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RNPEPL1Q9HAU8 725 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 GGA2Q9UJY4 613 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CCNCP24863 283 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 LPIN1Q14693 890 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PTRHD1Q6GMV3 140 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 NAPEPLDQ6IQ20 393 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CATSPER4Q7RTX7 472 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 NET1Q7Z628 596 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 COX4I2Q96KJ9 171 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TMBIM4Q9HC24 238 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 APOC1P02654 83 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 BMP3P12645 472 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 YWHAQP27348 245 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 S100A2P29034 98 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 GRK4P32298 578 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FAUP35544 74 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SOX11P35716 441 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 HIRAP54198 1017 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PEX3P56589 373 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TRIM32Q13049 653 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 INO80DQ53TQ3 878 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 BTBD8Q5XKL5 378 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FAM220AQ7Z4H9 259 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SULF1Q8IWU6 871 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TRPV3Q8NET8 790 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FUT8Q9BYC5 575 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 STOX2Q9P2F5 926 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 RAPGEFL1Q9UHV5 662 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SLC24A2Q9UI40 661 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 H2AFXP16104 143 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 GP5P40197 560 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 CCNG1P51959 295 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 XIAPP98170 497 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 OCLNQ16625 522 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FUT11Q495W5 492 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 MROH9Q5TGP6 573 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 USP21Q9UK80 565 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 GDF11O95390 407 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 Q3C1V9 767 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF467Q7Z7K2 595 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 S100A13Q99584 98 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SHCBP1LQ9BZQ2 653 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 KLHL11Q9NVR0 708 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SIK3Q9Y2K2 1263 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ARHGEF5Q12774 1597 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TSPAN4O14817 238 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 VPS26AO75436 327 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 USP11P51784 963 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 MAD2L1Q13257 205 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FRG1Q14331 258 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TBC1D22BQ9NU19 505 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 KLHL28Q9NXS3 571 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 XDHP47989 1333 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PDXKO00764 312 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PFKFB3Q16875 520 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 DHRSXQ8N5I4 330 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 LRRC20Q8TCA0 184 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 MAN1C1Q9NR34 630 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 NUDT5Q9UKK9 219 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TBC1D12O60347 775 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ANXA9O76027 345 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 NFYCQ13952 458 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 NR1I3Q14994 352 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TNIP3Q96KP6 325 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FBLN1P23142 703 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PTPN7P35236 360 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PTDSS1P48651 473 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ANKS6Q68DC2 871 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PDPK2PQ6A1A2 396 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SNRNP48Q6IEG0 339 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 FAM213AQ9BRX8 229 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 GPN1Q9HCN4 374 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 MCUBQ9NWR8 336 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 RBAKQ9NYW8 714 aaPredicted RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 PTCH1Q13635 1447 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 METTL21EPA6NDL7 271 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ALDH1A2O94788 518 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 MYL4P12829 197 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 CDC25AP30304 524 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 MTMR1Q13613 665 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 SCN4BQ8IWT1 228 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ADSSL1Q8N142 457 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 OR2W6PQ8NHA6 318 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 TFB1MQ8WVM0 346 aaKnown RBP6.35□□□□□ -1.39
CSMD1-201ENST00000335551 C12orf4Q9NQ89 552 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 GNG14A0A1W2PPG7 69 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 DENND3A2RUS2 1198 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 OR14I1A6ND48 311 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ADORA2BP29275 332 aa6.35□□□□□ -1.39
CSMD1-201ENST00000335551 ADD2P35612 726 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms